Paucibacter sediminis: PFX98_13510
Help
Entry
PFX98_13510 CDS
T10150
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pais Paucibacter sediminis
Pathway
pais00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pais00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PFX98_13510 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pais01007
]
PFX98_13510 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pais03016
]
PFX98_13510 (lysS)
Enzymes [BR:
pais01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
PFX98_13510 (lysS)
Amino acid related enzymes [BR:
pais01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PFX98_13510 (lysS)
Transfer RNA biogenesis [BR:
pais03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PFX98_13510 (lysS)
Prokaryotic type
Other AARSs
PFX98_13510 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WIT09953
UniProt:
A0AA95SJH1
LinkDB
All DBs
Position
complement(2913124..2914647)
Genome browser
AA seq
507 aa
AA seq
DB search
MTQHSPAAPHHSPAAQDENQLITERREKLAALRAKTAVPFPNDFKPQHRALPLAQRYGAL
ANEELEPQAVAVSVAGRLMLKRVMGKASFGTLQDATGRIQLFVTKDGVGEESYEAFKHLD
LGDIVGAEGTLFRTKTGELSVRVSNLRLLTKSLRPLPDKFHGMSDQEQKYRQRYVDLITD
EQARARFVARSKAVSSIRSHMVEHGFLEVETPMLHPIPGGANAKPFITHHNALDQEMYLR
IAPELYLKRLIVGGFERVFEINRNFRNEGISVRHNPEFTMMEFYAAYWTHHDLMDFTEEV
LRHAARAATGNARVSYAGKEVHLDQPFARLSVRDSLIAHAGLSAAEADDASALHAKLKAL
GEEPPKHWTLAELQFGMFEAVVEEKLWQPTFIIDYPVEVSPLARASDTNPKITERFELFI
TGREYANGFSELNDAEDQAARFQAQVANKDAGDEEAMFYDADFIRALEYGMPPTGGCGIG
IDRLMMLITDSPSIRDVILFPALRRES
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcacagccccgccgccccccaccacagccctgccgcgcaggatgaaaaccag
ctgatcaccgaacgccgcgagaaactggccgccctgcgcgccaagaccgccgtccccttc
cccaacgatttcaagccccagcaccgcgccctgccgctggcgcagcgctatggcgcgctg
gccaacgaggaactcgagccgcaggcggtggcggtgagcgtggcgggccgcctgatgctc
aagcgcgtgatgggcaaggccagcttcggcaccctgcaggacgccaccggccgcatccag
ctcttcgtcaccaaggacggcgtgggcgaggaaagctacgaggccttcaagcacctggat
ctgggcgacatcgtcggtgccgagggcacgctgttccgcaccaagacgggcgagctgtcg
gtgcgcgtcagcaatctgcgcctgctcaccaagagcctgcgcccgctgccggacaagttc
cacggcatgagcgaccaggagcagaagtaccgccagcgctatgtggacctgatcaccgac
gagcaggcgcgcgcccgcttcgtggcgcgctccaaggcggtgtcctcgatccgcagccat
atggtggagcatggtttcctggaagtggaaacgccgatgctgcacccgatcccgggcggc
gcgaacgccaagcccttcatcacccaccacaacgcgctggaccaggagatgtacctgcgc
atcgcgcccgagctctacctcaagcgcctgatcgtgggcggcttcgagcgcgtgttcgag
atcaaccgcaatttccgcaacgaaggcatctcggtccggcacaaccccgagttcacgatg
atggagttctatgcggcctactggacgcaccatgatctgatggacttcaccgaggaggtg
ctgcgccacgccgcgcgcgccgccaccggcaatgcgcgcgtcagctatgcgggcaaggaa
gtgcacctggaccagcccttcgcccgcctgtcggtgcgcgactcgctcatcgcccatgcc
ggcctctcggccgccgaggccgatgacgctagcgcgctgcatgccaagctgaaggcgctg
ggcgaggagccgcccaagcactggaccctggccgagctgcagttcggcatgttcgaggcg
gtggtggaagaaaagctctggcagcccaccttcatcatcgactacccggtggaggtctcg
ccgctggcgcgcgcctccgacaccaaccccaagatcaccgagcgcttcgagctcttcatc
accggccgcgagtacgccaacggcttctcggagctgaacgacgccgaagaccaggccgcg
cgcttccaggcccaggtggccaacaaggatgccggcgacgaggaggcgatgttctacgac
gccgacttcatccgcgcgctggaatacggcatgccccccaccggcggctgcggcatcggc
atcgaccggctgatgatgctgatcaccgactcgccgagcatccgcgacgtgatcctgttc
ccggcgctgcgccgggaatcatga
DBGET
integrated database retrieval system
