Paucibacter sediminis: PFX98_13795
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Entry
PFX98_13795 CDS
T10150
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pais Paucibacter sediminis
Pathway
pais03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pais00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PFX98_13795 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pais03019
]
PFX98_13795 (rnc)
03009 Ribosome biogenesis [BR:
pais03009
]
PFX98_13795 (rnc)
03036 Chromosome and associated proteins [BR:
pais03036
]
PFX98_13795 (rnc)
Enzymes [BR:
pais01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
PFX98_13795 (rnc)
Messenger RNA biogenesis [BR:
pais03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PFX98_13795 (rnc)
Ribosome biogenesis [BR:
pais03009
]
Eukaryotic type
90S particles
RNase
PFX98_13795 (rnc)
Prokaryotic type
rRNA processing factors
PFX98_13795 (rnc)
Chromosome and associated proteins [BR:
pais03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
PFX98_13795 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
WIT10009
UniProt:
A0AA95SU35
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All DBs
Position
2972828..2973532
Genome browser
AA seq
234 aa
AA seq
DB search
MKTPLDSLQQRLGYQFADPGLLVRALTHRSFGADHNERLEFLGDAVLSLAVSSLLYARFA
GSDEGDLTRIRAHLVREDSLHRLALGIGLPEVLRMSEGEARGGGAQRPSILADATEAIIG
AAFLDGGYAAALELVRGLLGDLINGSVSDNWAKDAKTALQELLQSRRLAVPTYRITETRG
QAHAQTFAVECAVPALNLAKSGEGRSRRAAEQDAARRMLDELMARDKPGTGLRD
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgccgctggattccctgcagcaaaggctcggctatcagtttgccgatccgggc
ctgctggtgagggcgttgacgcatcgcagctttggcgccgatcacaacgagcgcctggag
ttcctgggcgacgcggtgctgagcctggcggtttcgagcctgctgtacgcgcgtttcgcg
ggctccgacgagggcgacctgacgcgcatacgcgcccatctggtgcgcgaggacagcctg
caccgcctggccctgggcataggtctgcccgaggtcttgcgcatgagcgagggcgaggcg
cgcggcggcggcgcccagcgcccctcgatcctggcggatgccaccgaggccatcattggc
gcggcctttctggacggtggatacgccgccgcgctcgaactggtgcgcggcctgctgggc
gatctgatcaatggttcggtgagcgacaactgggccaaggatgccaagaccgcgctgcag
gagttgctgcaatcgcgccgtctggcggtgcccacctaccgcatcaccgagacccgcggc
caggcacatgcccagacctttgcggtcgaatgcgcggtgccggcgctgaatctggccaag
agcggcgagggccgctcgcggcgcgccgccgagcaggacgcggcacggcgtatgcttgat
gaattgatggcgcgtgacaagcccggcaccggcttgcgcgactga
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integrated database retrieval system