Paucibacter sediminis: PFX98_13805
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Entry
PFX98_13805 CDS
T10150
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
pais Paucibacter sediminis
Pathway
pais03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pais00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PFX98_13805 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pais03400
]
PFX98_13805 (recO)
DNA repair and recombination proteins [BR:
pais03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PFX98_13805 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PFX98_13805 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
WIT10011
UniProt:
A0AA95SNR0
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All DBs
Position
2974583..2975359
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AA seq
258 aa
AA seq
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MNARATRAPAAQLAYVLHHYDWSESSLILDLFTREQGRLAVVAKGAKRPYSQLRAVLLPF
QRIQVSLSKPSKGDGGPEVQTLRGAEWASTHAMPAGAALFSGYYLNELLLKLLARQDPHP
QLFDAYAQTLPLLHASEDAQSQAALRAFELRLLNDSGLLPDLSVVTPTQLPLELERSYVL
TAESGVVPPSHAGAHFKGAELIQLQAALLHGSVEALQQACMGALPALKTALRGLLHYHLG
HKPLRTRGVMLDVQKLLA
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcacgtgccacgcgtgctcccgccgcgcagctggcctatgtgctgcaccactac
gactggagcgaatccagcctgatcctggacctgttcacgcgcgagcagggccggctggcg
gtggtggccaagggtgccaagaggccttactcgcagctgcgcgccgtgctgctgcccttc
cagcgcatccaggtcagcctgtccaagcccagcaagggcgatggcggccccgaggtgcag
acgctgcgcggcgccgaatgggccagcacccacgccatgccggccggtgcggcgctgttc
tcgggctactacctgaacgagctcttgctcaagctgctggcgcgccaggacccgcacccc
cagctcttcgatgcctatgcccagactctgccgctgctgcacgccagcgaggatgcgcag
tcgcaggcggccctgcgcgccttcgagctgcgcctgctgaacgacagcggcctcctgcct
gatcttagcgtcgtcacgcccacccagctgccgctggagctggagcgcagctatgtgctg
acggccgagtccggtgtcgtgccgcccagtcatgcgggcgcgcacttcaagggcgccgag
ctgatacagctgcaggccgccttgctgcatggcagcgtcgaagctctgcagcaggcctgc
atgggggcgctgcccgcactcaagacggcgctgcgcggcctgcttcactatcatctgggc
cacaagcccctgcgcacgcgtggcgtgatgctggatgtgcagaaactcctcgcctga
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