Paucibacter sediminis: PFX98_15085
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Entry
PFX98_15085 CDS
T10150
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pais Paucibacter sediminis
Pathway
pais00061
Fatty acid biosynthesis
pais00071
Fatty acid degradation
pais01100
Metabolic pathways
pais01212
Fatty acid metabolism
pais02024
Quorum sensing
pais04146
Peroxisome
Module
pais_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pais00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PFX98_15085
00071 Fatty acid degradation
PFX98_15085
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PFX98_15085
09145 Cellular community - prokaryotes
02024 Quorum sensing
PFX98_15085
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pais01004
]
PFX98_15085
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pais04147
]
PFX98_15085
Enzymes [BR:
pais01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PFX98_15085
Lipid biosynthesis proteins [BR:
pais01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PFX98_15085
Exosome [BR:
pais04147
]
Exosomal proteins
Exosomal proteins of breast milk
PFX98_15085
Exosomal proteins of breast cancer cells
PFX98_15085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
WIT10250
UniProt:
A0AA95SMK1
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All DBs
Position
3253253..3255112
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AA seq
619 aa
AA seq
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MSNLWDALQPVDRQPVSVAGETLPQVFWHACAERGAQVFLREKKLGLWTAWSWAQTGVAV
REIAMGLAALGFKPGDCASILANTVLPWLLADLGIQTAGGVTNGIYPTDAASQVHYLCAD
SSTTLLFVEDEEQLDKALEVRAELPLLRHIIVFDMAGLQRFADPMVMSLAALRELGRAHD
AGHAPLFAERLASRQGGDLAILVYTSGTTGKPKGAMHSHAGLVYSMRMAVRGLPQDGRDE
RMCFLPLCHIAERMVGAYASLYAGAVLNFVENPATVAENVREIAPTLFFAVPRVWEKFYS
GVAIAIKEASPLQQAVYAWGLGVGTRVAELVLAGRAVPVGLRLKFRLARLLALDNVRKML
GIHRCRALLTGAAPISPELIRWYLALGVPMLEGWAQTESCALGTIMRPDAMRPGTIGVAA
DGVEVRLDPHTQELLMRGPNVFMGYLNQPEKTAETIDKDGWLHTGDVGTVDVQGFFRITD
RMKDIIITAGGKNITPSEWENELKFSPYITDAVVIGDKRPYLSVLIMIDQENVEKFAQDR
DVPFSNYASLTRAPAVRELVQGEIDKVNKQFARVEQIKQFRLLETQLGAEDDELTPTMKL
KRAFVQRKYADLIESMYRS
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatctctgggacgcattgcagccggtggatcgccaaccggtgtcggtggcgggc
gagaccctgccgcaggtgttctggcatgcctgtgccgagcgtggcgcgcaggtgtttctg
cgcgagaagaagcttggcctgtggacggcctggagctgggcgcagaccggcgtggcggtg
cgcgagatcgcgatggggctggcggcgctgggcttcaagccgggcgattgcgcttccatc
ctggccaacacggtgctgccctggctgctggccgacctgggcattcagacggccggtggc
gtcaccaacggtatctaccccaccgatgcggccagccaggtgcattatctgtgcgccgac
tcgtcgaccacgctgctgttcgtggaggacgaggagcaactcgacaaggccctggaggtg
cgcgccgagttgccgctgctgcgccacatcatcgtcttcgacatggccgggctgcagcgc
tttgccgatccgatggtgatgagcctggcggcgctgcgcgaactggggcgggcccacgat
gccgggcatgcgccactctttgccgagcgcctggcctcgcgccaaggcggcgatctggcc
atcctggtctacacctcgggcaccaccggcaaacccaagggcgccatgcacagccatgcg
ggcctggtctacagcatgcgcatggcggtgcgtggcctgccacaggacgggcgcgacgag
cgcatgtgctttctgccgctgtgccatatcgccgaacgcatggtgggtgcctatgcctcg
ctgtacgccggcgcggtgctgaacttcgtggagaacccggccaccgtggccgagaacgtg
cgcgagatcgcgcccaccctgttcttcgccgtgccgcgggtgtgggagaagttctattcg
ggcgtcgcgattgcgatcaaggaggcctcgccgctgcagcaggccgtgtatgcctggggc
ctgggcgtgggcacgcgcgtggccgagctggtgctggccgggcgggccgtgccggtgggc
ctgcggctgaagttccggctggcacgcctgctggccctggacaatgtgcgcaagatgctg
ggcatccatcgctgccgggccctgctgaccggcgcggcgccgatctcgccggagctgatc
cgctggtatctcgcgctgggcgtgccgatgctggagggctgggcccagacggagtcctgt
gcgctgggcaccatcatgcggcccgacgcgatgcggccgggcaccatcggtgtggcggcc
gatggcgtggaggtcaggctggacccgcacacccaggagctgctgatgcgcggcccgaat
gtcttcatgggctatctgaaccagcccgagaagaccgccgaaacgatagacaaggacggc
tggctgcataccggcgacgtgggcacggtggatgtgcagggcttcttccgcatcaccgac
cgcatgaaggacatcatcatcaccgccggcggcaagaacatcacgcccagcgaatgggag
aacgagctgaagttctcgccctacatcaccgacgcggtggtgatcggtgacaagcgcccc
tatctcagcgtgctgatcatgatcgaccaggagaacgtcgagaagttcgcccaggaccgc
gacgtgcccttctccaactacgccagcctgacccgcgcgccggcggtgcgcgagctggtg
cagggcgagatcgacaaggtcaacaagcagttcgcccgcgtggagcagatcaagcagttc
cgcctgctcgagacccagctgggcgccgaggacgatgagctgacgcccaccatgaagctc
aagcgcgcctttgtgcagcgcaagtacgccgacttgattgaatccatgtaccgcagctag
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