Paucibacter sediminis: PFX98_16340
Help
Entry
PFX98_16340 CDS
T10150
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pais Paucibacter sediminis
Brite
KEGG Orthology (KO) [BR:
pais00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pais03009
]
PFX98_16340 (rimO)
Enzymes [BR:
pais01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PFX98_16340 (rimO)
Ribosome biogenesis [BR:
pais03009
]
Prokaryotic type
ribosomal protein modification factors
PFX98_16340 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
CLP1_P
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
WIT10474
UniProt:
A0AA95SUG1
LinkDB
All DBs
Position
3519520..3520920
Genome browser
AA seq
466 aa
AA seq
DB search
MNEAPVQNSAPKIGFVSLGCPKALTDSELILTQLRAEGYETSKTFAGADLVIVNTCGFID
DAVKESLDTIGEALAENGKVIVTGCLGAKAGHASSDAGSLVREMHPSVLAVTGPHATQEV
MDAVHTHVPKPHDPFIDLVPEARGVAGIKLTPKHYAYLKISEGCNHRCSFCIIPSMRGDL
VSRPIGDVLNEARALFESGVKELLVVSQDTSAYGVDVKYRMGFWDGKPVKTRMLDLVAQM
GELAKQYGAWVRLHYVYPYPHVDEVLPLMAEGLVLPYLDVPFQHAHPDVLKRMKRPANGE
KNMERILRWRESCPDIVIRSTFIAGFPGETEAEFRYLLDFMQEAQIDRAGCFAYSPVEGA
SANELDGALPEAVREERRARFMEVAERVSAAKLARRVGATMQVLVDSAPALGRKGGVGRS
YADAPEIDGTVRLLPPEKASKQLKVGEFTRARIVATEGHDLIAMPI
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagcacccgtccagaactccgcccccaagatcggcttcgtcagcctaggctgc
cccaaggcgctgaccgactccgagctcatcctcacgcagctgcgtgcggaggggtatgaa
acctccaagacctttgccggcgccgatctggtgattgtcaacacctgcggcttcatcgat
gacgcggtgaaggagagcctggacaccatcggcgaggccctggccgagaacggcaaggtc
atcgtcaccggctgcctgggcgccaaggccggccatgccagctcggacgccggcagcctg
gtgcgcgagatgcatcccagcgtgctggccgtgaccggcccgcatgccacgcaggaggtg
atggacgcggtgcacacccatgtgcccaagccccacgatcccttcatcgatctggtgccc
gaggcgcgcggcgtggccggcatcaagctcacgcccaagcattacgcctatctgaagatc
agcgagggctgcaaccaccgctgcagcttctgcatcatccccagcatgcgcggtgacctg
gtctcgcgcccgatcggcgacgtgctgaacgaggcgcgcgcgctgttcgagtcgggcgtg
aaggagctgctggtggtgagccaggacaccagcgcctatggcgtggacgtcaagtaccgc
atgggcttctgggatggcaagccggtcaaaacccgcatgctggacctggtggcgcagatg
ggcgagctggccaagcaatacggtgcctgggtgcgcctgcactacgtctacccctatccc
catgtggacgaggtgctgccgctgatggccgaaggactggtgctgccctatctggacgtg
cccttccagcacgcccacccggacgtgctcaagcgcatgaagcgccccgccaatggcgag
aagaatatggagcgcatcctgcgctggcgcgagagctgcccggacatcgtgatccgctcc
accttcatcgccggcttccccggcgaaaccgaggccgaattccggtacctgctggacttc
atgcaggaggcgcagatcgaccgcgccggctgcttcgcctactcgccggtggagggcgcc
agcgccaacgagctggacggtgccttgcccgaggccgtgcgcgaggagcgccgtgcccgc
ttcatggaagtggccgagcgggtttccgccgccaagctggcgcgccgtgtcggcgccacc
atgcaggtgctggtggattccgccccggccctgggtcgcaagggtggcgtggggcgctcc
tacgccgacgcgccggagatcgacggcaccgtgcgcctgctgccccccgagaaggccagc
aagcaactcaaggtgggcgagttcacgcgtgcgcgcatcgtcgccaccgaaggccatgac
ctgatcgccatgcccatatga
DBGET
integrated database retrieval system
