Paucibacter sediminis: PFX98_17760
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Entry
PFX98_17760 CDS
T10150
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pais Paucibacter sediminis
Brite
KEGG Orthology (KO) [BR:
pais00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pais03032
]
PFX98_17760
03036 Chromosome and associated proteins [BR:
pais03036
]
PFX98_17760
03400 DNA repair and recombination proteins [BR:
pais03400
]
PFX98_17760
DNA replication proteins [BR:
pais03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PFX98_17760
Chromosome and associated proteins [BR:
pais03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
PFX98_17760
DNA repair and recombination proteins [BR:
pais03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
PFX98_17760
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
WIT10748
UniProt:
A0AA95SK67
LinkDB
All DBs
Position
complement(3830941..3831261)
Genome browser
AA seq
106 aa
AA seq
DB search
MTRSDLVAHLAERFGQLTQRDTEFAVKTILDAMSDALARGHRIEIRGFGSFSINRRPPRM
GRNPRSGEQVLIPEKLVPHFKPGKALREAVDEQLPLDDASLPRTLD
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atgacacgttccgacctcgttgcccatctggcagagcgctttggccagctcacccagcgc
gacaccgagttcgccgtcaagacgatactggacgcgatgtccgatgccctggcccgcggc
caccgcatcgagatccgcggctttggcagcttttccatcaaccgccgcccgccccgcatg
ggccgcaatccgcgcagcggcgaacaggtgctgatccccgagaagctggtgccccatttc
aagccaggcaaggccctgcgcgaagcggtggacgagcagttgccgctggacgacgccagc
ctcccgcgcacgctggattga
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