Paucibacter sediminis: PFX98_18455
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Entry
PFX98_18455 CDS
T10150
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pais Paucibacter sediminis
Pathway
pais00020
Citrate cycle (TCA cycle)
pais00190
Oxidative phosphorylation
pais00650
Butanoate metabolism
pais00720
Other carbon fixation pathways
pais01100
Metabolic pathways
pais01110
Biosynthesis of secondary metabolites
pais01120
Microbial metabolism in diverse environments
pais01200
Carbon metabolism
Module
pais_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pais_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pais_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pais00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PFX98_18455 (sdhA)
00650 Butanoate metabolism
PFX98_18455 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
PFX98_18455 (sdhA)
00720 Other carbon fixation pathways
PFX98_18455 (sdhA)
Enzymes [BR:
pais01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
PFX98_18455 (sdhA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
HI0933_like
Thi4
FAD_binding_3
GIDA
Motif
Other DBs
NCBI-ProteinID:
WIT10877
UniProt:
A0AA95NDM2
LinkDB
All DBs
Position
3983933..3985708
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AA seq
591 aa
AA seq
DB search
MQIGTTLAKRKFDVVIVGAGGSGMRASLQLSLAGLNVAVLSKVFPTRSHTVAAQGGIGAS
LGNMSEDNWHYHFFDTIKGSDYLGDQDAIEFMCREAPKVVYELEHFGMPFDRNPDGTIYQ
RPFGGHTANYGEKPVQRACAAADRTGHALLHTLYQQNVKAKTQFFVEWMALDLIRDAEGD
VVGVTALEMETGEIHILEAKTVLMATGGAGRIYAASTNAFINTGDGLGMAARSGIPLEDM
EFWQFHPTGVAGAGVLLTEGCRGEGAILRNSNGERFMERYAPTLKDLAPRDFVSRSMDQE
IKEGRGCGPNKDYVLLDMTHLGAETIMKRLPSVFEIGHNFANVDITKEPIPVVPTIHYQM
GGIPTNVHGQVVIPKNGKVNDIVNGLYAVGECSCVSVHGANRLGTNSLLDLVVFGRAAGN
HIVDFALKNKNHKPLPKDAADLTLARLARLESATNGEYAQDVANDIRSTMQKHAGVFRTQ
AVMNEGVSKILEVAERVKSIGLKDKSKVFNTARVEALEVDNLIEAAKATMISAAARPESR
GAHAHNDFPNRDDANWMKHTLWYSEGNRLDYKPVNLQPLTVESVPPKVRTF
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattggaacgacgctcgcaaagcgcaaattcgatgtggtgatcgtcggcgccggt
ggctccggcatgcgcgcatcgctgcaactctcgctggccggcctgaacgtggccgtgctg
tccaaggtgttcccgacgcgctcgcacacggtggcggcgcagggcggcatcggtgcctcc
ctgggcaatatgtccgaggacaactggcactatcacttcttcgacaccatcaagggttcg
gactacctgggcgaccaggatgcgatcgaattcatgtgccgcgaggcgcccaaggtcgtg
tacgagcttgagcatttcggcatgcccttcgaccgcaatccggatggcaccatctaccag
cgcccctttggcggccacaccgccaactacggtgaaaagccggtgcagcgcgcctgcgcc
gcggccgaccgtaccggccacgcgctgttgcacaccctgtaccagcagaacgtcaaggcc
aagacccagttcttcgtcgaatggatggcgctggacctgatccgcgacgccgagggcgat
gtggtgggcgtgactgcgctggaaatggaaaccggcgagatccacatcctcgaagccaag
accgtgctgatggccaccggcggggcagggcgcatctacgccgcctccaccaatgccttc
atcaacaccggtgacggcctgggcatggccgcccgctccggcatcccgctggaagacatg
gagttctggcagttccaccccaccggcgtggccggcgcgggcgtgctgctgaccgaaggc
tgccgcggcgagggcgcgatcctgcgcaacagcaatggcgagcgcttcatggagcgctat
gcgccgacgctgaaggacctggcaccgcgtgacttcgtgtcgcgctcgatggaccaggaa
atcaaggaaggtcgcggctgcggtcccaacaaggactatgtgctgctggacatgacccac
ctgggcgccgagaccatcatgaagcgcctgccctcggtgttcgagatcggccacaacttc
gccaacgtcgacatcaccaaggagccgattcccgtggtgccgaccatccactaccagatg
ggtggcattccgacgaatgtgcatggccaggtggtgatccccaagaatggcaaggtcaac
gacatcgtcaacggcctctacgccgtgggtgagtgctcctgcgtgagcgtgcacggcgcc
aaccgcctgggcaccaactcgctgctggacctggtggtgttcggccgcgcggccggcaac
cacatcgtcgacttcgcgctcaagaacaagaaccacaagcccctgcccaaggacgcggcg
gacctgaccctggcacgcctggcgcgcctggagtcggccaccaacggcgaatacgcgcag
gacgtggccaacgacattcgctcgacgatgcaaaagcacgccggcgtgttccgcacccag
gcggtgatgaacgagggcgtgagcaagatcctggaagtggccgagcgcgtcaagagcatc
ggcctgaaggacaagagcaaggtgttcaacaccgcgcgcgtcgaggccctggaggtcgac
aacctgatcgaggccgccaaggccaccatgatctcggcggccgcccgcccggaaagccgt
ggcgcgcatgcgcacaacgacttccctaaccgcgacgacgccaactggatgaagcacacg
ctgtggtactccgaaggcaaccgcctcgactacaagcccgtgaacctgcaaccgctgacg
gtggaatcggtgccgcccaaggtccgcaccttctaa
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