Paucibacter sediminis: PFX98_18880
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Entry
PFX98_18880 CDS
T10150
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pais Paucibacter sediminis
Pathway
pais00300
Lysine biosynthesis
pais01100
Metabolic pathways
pais01120
Microbial metabolism in diverse environments
pais01230
Biosynthesis of amino acids
Module
pais_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pais00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PFX98_18880 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pais01002
]
PFX98_18880 (dapE)
Enzymes [BR:
pais01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
PFX98_18880 (dapE)
Peptidases and inhibitors [BR:
pais01002
]
Metallo peptidases
Family M20
PFX98_18880 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
WIT10955
UniProt:
A0AA95SN76
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Position
complement(4088253..4089410)
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AA seq
385 aa
AA seq
DB search
MSQADSTFALLEQLIALPSVTPRDAGCLELLGARLQALGFELERMDSGPEDFRVSNLWAI
RRGSAADGPVLMFAGHTDVVPTGSLAAWTSDPFVPSYRDGRLYGRGTADMKSSLAAMVVA
CEAFVAAHPGHAGSIAFLLTSDEEGPARDGTVVCCERLKARGQRLDYAIVGEPTSVAQIG
DMVKNGRRGTLSGKLRVQGIQGHVAYPQLARNPVHQAAPALAELAAELWDQGNRYFPPTT
FQISNIKAGTGATNVIPGELELDFNFRFSTESTPDGLKARVHALLDRHGLEYGLDWVLGG
EPFLTPVGNLSAAVSAAIEAETGRRPELSTTGGTSDGRFIAKICPQVLEFGPINASIHKI
DEYVPVDNIAPLTAIYRRTLENLLL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggcagacagcacttttgcgctgctcgagcagctgatcgccctgccctcggtg
acgccgcgcgatgccggttgcctggagctgctgggcgcgcgcctgcaggccctgggcttc
gagctggagcgcatggactcggggcccgaggacttccgcgtcagcaatctctgggcgatc
aggcgcggaagcgccgccgacggtccggtgctgatgtttgccggccataccgacgtggtg
cccaccggctcgctggcggcctggaccagcgaccccttcgtgcccagctaccgcgatggc
cgcctctacggccgcggcacggccgacatgaagagctcgctggcggccatggtggtggcc
tgcgaggcctttgtggccgcgcatcctggccatgcaggcagcatcgccttcctgctcacc
agcgacgaggaaggcccggcccgcgatggcacggtggtctgctgcgagcgcctgaaggcg
cgcggccagcgcctggactacgccatcgtcggcgagccgacctcggtggcgcagatcggc
gacatggtcaagaacggccgccgcggcacgctcagcggcaagctgcgcgtgcagggcatc
cagggccatgtggcctacccacagctggcgcgcaacccggtgcaccaggccgcgcccgcg
ctggccgagctggccgccgagctctgggaccagggcaaccgctatttcccgcccaccacc
ttccagatctccaatatcaaggccggtaccggcgccaccaatgtgattcccggcgagctg
gagctggatttcaacttccgcttttccaccgagtccacgccggatggcctgaaggcgcgc
gtgcatgcgctgctcgatcgccatggcctcgaatacggcctcgactgggtgctgggcggc
gagcccttcctgacgccggtgggtaatctctcggccgcggtgagcgccgccatcgaggcc
gagaccggccgccggcccgagctctcaaccaccggtggcacctcggacggccgcttcatc
gccaagatctgcccccaggtgctggagttcggccccatcaacgccagcatccacaagatc
gacgagtacgtaccggtcgacaatatcgcgccgctcaccgccatctaccggcgcaccctg
gagaacctgttgctgtga
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