Paucibacter sediminis: PFX98_19990
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Entry
PFX98_19990 CDS
T10150
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
pais Paucibacter sediminis
Brite
KEGG Orthology (KO) [BR:
pais00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pais03000
]
PFX98_19990
Transcription factors [BR:
pais03000
]
Prokaryotic type
Helix-turn-helix
LacI family
PFX98_19990
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
DUF302
TetR_N
HTH_24
HTH_31
Cro
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
WIT11158
UniProt:
A0AA95NCH5
LinkDB
All DBs
Position
4311746..4312777
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AA seq
343 aa
AA seq
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MSAPTAPKRRRATGRTTLAEVAQAAGVSPITVSRALRGERAVASELVTRVREAAERLGYV
PDPAARALASSRSTQVAVLIPLLSNALFVDLLDAAQRSLLEAGYQSLIGVTHYRPDEEEA
LLRAYLMHRPAGLIVTGFDRTEAARRLIADSGVPCVHVMETHAEPGVYSVGFSQSDAGRA
MTQCLLAHGRQRIAFVAAQLDPRTLQRASGYRQAMQLAGRHEPKRELLSPRPSSMALGAE
LFEQLMREQPDTDAIFFCNDDLAQGALLAALRLGIAVPARVAVAGFNDLTGSDQMLPALS
TVRTPRAAIGREAARMLLGLIRGEQPAAPSLDLGYELVLRQSL
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgccaaccgcaccaaaacgacgccgcgccaccggccgcaccacgctggccgag
gtggcccaggcagcgggcgtcagccccatcactgtgtcgcgtgcgctgcgcggcgaacgc
gcggtcgccagcgagctggtgacccgggtgcgcgaggccgccgaacgcctgggctatgtg
cccgacccggcggcgcgcgcgctggcctcctcgcgcagcacccaggtggccgtgctgatc
cccttgctcagcaatgccctgttcgtggacctgctggacgcggcccagcgcagcctgctg
gaggccggctaccaaagcctgatcggcgtcacccattaccgccctgacgaggaggaggcg
ctgctgcgcgcctacctgatgcaccgtccggccggcctgatcgtgacgggcttcgaccgc
accgaggccgcccggcgcctgatcgccgacagcggcgtgccctgcgtgcatgtcatggaa
acgcatgccgagccgggggtctacagcgtgggcttctcgcagtcggacgccggccgcgcg
atgacgcaatgcctgctcgcacatggccgccagcgcatcgccttcgtggccgcccaactg
gatccgcgcaccctgcagcgcgccagcggctatcgccaggccatgcagctggccggccgc
cacgagcccaagcgcgagctgctctcgccccgcccctcctcgatggcgctgggcgccgaa
ctgttcgagcagctgatgcgcgagcagcccgacaccgatgcgatcttcttctgcaacgac
gacctggcccagggcgcgctgctggccgcgctgcgcctgggcattgccgtgcccgcgcgg
gtggcggtggcaggcttcaacgacctgaccggcagcgaccagatgctgccggcgctcagc
acggtgcgcacgccgcgtgccgcgatcggccgcgaagccgcacgcatgctgctgggcctg
atccgcggcgagcagcccgccgcgcccagcctggacctgggctacgagctggtgctgagg
caaagcctctag
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