Paucibacter sediminis: PFX98_20805
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Entry
PFX98_20805 CDS
T10150
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pais Paucibacter sediminis
Brite
KEGG Orthology (KO) [BR:
pais00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pais03016
]
PFX98_20805 (truB)
Enzymes [BR:
pais01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PFX98_20805 (truB)
Transfer RNA biogenesis [BR:
pais03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PFX98_20805 (truB)
Prokaryotic type
PFX98_20805 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
WIT11312
UniProt:
A0AA95NED8
LinkDB
All DBs
Position
complement(4485533..4486492)
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AA seq
319 aa
AA seq
DB search
MNAPKPQRQRIQRRALHGVLLLDKPLGLSSNDALQKAKWLLRAEKAGHTGTLDPLATGLL
PLCFGAATKFSQVSLDADKAYEATLRLGQTTTTGDGEGEVLETREVAVTRAQIEAACAQF
TGLISQVPPMYSALKHEGKALYDYARQGIEIERPARQVTIHSIDILDWQAEQLTIAVRCS
KGTYIRTLGEDIGRVLGCGAHLSALRRTASGPVTLDGAISLDALAAMTEAEREDLLRPPD
ALLADWPEQRLDAAEAARFLSGLRRRLYSPSGVADVSQVKVYGPEPQAFLGSAHIKGGEL
IADRLLSPQEVQALLGTAA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcccccaaaccccagcgccagagaatccagcgccgtgccctgcacggtgtgctg
cttctcgacaagccgctgggcctgtccagcaacgacgcgctgcagaaagccaaatggctg
ctgcgggcggaaaaggccggccataccggcacgctggacccgctggccacggggctgctg
ccgctgtgctttggggccgctaccaagttcagccaggtcagcctggatgccgacaaggcc
tacgaggccacgctccggctgggccagaccaccaccaccggcgacggcgagggcgaggtg
ctggagacgcgcgaggtggcagtcacccgcgctcagatcgaggcggcctgtgcccagttc
accggcctgatctcgcaagtgccaccgatgtactcggcgctcaagcacgaaggcaaggcg
ctgtacgactatgcccgtcagggcatcgagatcgagcgtccggcgcgccaggtcaccata
cacagcattgacatcctcgactggcaagctgagcagctgacgatcgcggtgcgctgctcc
aagggcacctacatccgtaccctgggcgaggacatcggccgcgtgttgggctgtggtgcg
cacctcagcgcgctgcgccgcaccgccagcggtccggtgacgctggacggcgccatcagc
ctggatgcgctcgccgcgatgaccgaggccgagcgcgaagacctgctgcgcccgcccgac
gccttgctggcggactggcctgagcagcgtctggatgctgccgaggcggcccgctttcta
tccgggttgcggcgtcgcctgtattctccaagcggcgtcgcagatgtcagtcaggtgaag
gtctacgggcccgaaccgcaggcctttctgggcagcgcacatatcaagggcggcgagttg
atcgccgaccgcctgctcagcccgcaggaagtccaggcactgcttggcaccgcggcctga
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