Paucibacter sediminis: PFX98_21135
Help
Entry
PFX98_21135 CDS
T10150
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
pais Paucibacter sediminis
Pathway
pais02020
Two-component system
pais02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pais00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PFX98_21135
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PFX98_21135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pais03000
]
PFX98_21135
Transcription factors [BR:
pais03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
PFX98_21135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
MarR_2
Sigma70_r4
GntR
HTH_23
TrmB
YbjN
DUF1155
Motif
Other DBs
NCBI-ProteinID:
WIT11374
UniProt:
A0AA95SVE9
LinkDB
All DBs
Position
4567230..4567934
Genome browser
AA seq
234 aa
AA seq
DB search
MNSPVLTIPERSNIESGSWFSKLSLPLRSDILSRATVRRLSDDALLSCRGEPAEEWVGVA
KGAVRISSVSLSGKQITLTYVEPGTWFGDISLFDGLPRTHDATAHGDTTLLVVRKPDFRE
LLARHSELYEALLRLNCRRLRLMFDVVEDLNTRPLASRLAKQILLLARSYGVPQGEEIRI
GLQLAQEDLAQMLGASRQRVNQELKGFERDGAVRVEPTRLVVLSKEKLMAIAAK
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgaatagcccggttcttacaattcccgaacgcagcaacatcgagtcggggtcgtggttc
tcaaaactctcactgcccttgcgcagcgacatcctctcccgtgccacggtccgacgcctc
agcgacgacgccctgctctcctgccgtggcgagccggccgaggaatgggtgggcgtggcc
aagggcgcggtgcgcatcagctcggtctcgctctcgggcaagcagatcacccttacttat
gtggagcccggcacctggttcggcgacatctcgctgttcgacggcctgccgcgcacccac
gatgccaccgcgcatggcgacaccaccctgctggtggtgcgcaaacccgatttccgcgaa
ctgctggcgcgccactccgagctctacgaggcgctgctgcgcctgaactgccggcgcctg
cgcctgatgttcgacgtggtggaagacctcaacacgcggccactggcctcgcgcctggcc
aagcagatcctgctgctggcgcgcagctacggcgtgccgcagggcgaggaaatccgcatc
ggcctgcagctggcgcaggaagacctggcgcagatgctgggcgcctcgcgccagcgcgtc
aaccaggagctcaagggcttcgagcgcgacggtgcggtgcgcgtcgagcccacgcgcctg
gtggtgctgagcaaggaaaaattgatggcgatcgccgccaagtag
DBGET
integrated database retrieval system
