Paucibacter sediminis: PFX98_21585
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Entry
PFX98_21585 CDS
T10150
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pais Paucibacter sediminis
Brite
KEGG Orthology (KO) [BR:
pais00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pais03032
]
PFX98_21585
03036 Chromosome and associated proteins [BR:
pais03036
]
PFX98_21585
03400 DNA repair and recombination proteins [BR:
pais03400
]
PFX98_21585
DNA replication proteins [BR:
pais03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PFX98_21585
Chromosome and associated proteins [BR:
pais03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PFX98_21585
DNA repair and recombination proteins [BR:
pais03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PFX98_21585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
UBA_HYPK
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
WIT11453
UniProt:
A0AA95SKU1
LinkDB
All DBs
Position
complement(4652222..4652494)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIEHIAKQADISKAAAGRALEALIGGVKTTLKKNGSVSLVGFGTFSVTKRAARSG
RNPRTGDTIKIKSAKVPKFRPGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtccgaactgatcgagcacattgccaagcaggccgacatttccaaggcggcg
gcggggcgtgcgctggaggcgctgattggtggtgtgaagaccacgttgaagaagaatggc
tcggtttctctggtaggcttcggcaccttcagcgtcacgaagcgtgccgcacgcagcggg
cgcaatccgcgtaccggcgacacgatcaagatcaagtcggccaaggtgcccaagttccgc
cctggcaaggcgctcaaggacgcggtgaactga
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