Paucibacter sediminis: PFX98_22265
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Entry
PFX98_22265 CDS
T10150
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pais Paucibacter sediminis
Pathway
pais03030
DNA replication
pais03430
Mismatch repair
pais03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pais00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PFX98_22265 (dnaQ)
03430 Mismatch repair
PFX98_22265 (dnaQ)
03440 Homologous recombination
PFX98_22265 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pais03032
]
PFX98_22265 (dnaQ)
03400 DNA repair and recombination proteins [BR:
pais03400
]
PFX98_22265 (dnaQ)
Enzymes [BR:
pais01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PFX98_22265 (dnaQ)
DNA replication proteins [BR:
pais03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PFX98_22265 (dnaQ)
DNA repair and recombination proteins [BR:
pais03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PFX98_22265 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WIT11582
UniProt:
A0AA95NEU9
LinkDB
All DBs
Position
complement(4798019..4798729)
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AA seq
236 aa
AA seq
DB search
MRQIFFDTETTGLRAEAGDRIIEVGCVEMVNRQLTGNNLHLYINPERASDEEAVRIHGLT
DEFLADKPVFASVAEELLEFLRGAELVIHNAGFDVGFMNAELRRLGQPPITDIVGGVRDT
LLMARDMFPGKANSLDALCKRLEVDNSSRTLHGALLDAELLAEVYIRLTRGQDSLVMDEG
GGNAGSGNADFQLEAIDFSRFQLPVLAASAAELEAHQSLLADLDKASGGKRIWQEA
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcagatatttttcgataccgaaaccaccggcctgcgtgccgaggcgggcgaccgc
atcatcgaggtcggctgcgtcgagatggtgaaccgccagctcaccggtaacaacctgcac
ctctacatcaaccccgagcgcgcgagcgatgaggaggcggtgcgcatccacggcctgacc
gacgaattcctggccgacaagccggtgttcgccagtgtggccgaggagttgctggagttt
ctgcgtggcgccgaactggtgatccacaacgccggcttcgacgtcggcttcatgaacgcc
gagctgcgccggctgggccagccgcccatcaccgacatcgtcggcggcgtgcgcgacacc
ttgctgatggcgcgcgacatgttccccggcaaggcgaactcgctcgacgcgctgtgcaag
cgcctggaggtcgacaactccagccgcaccctgcacggcgccttgctggacgccgagctg
ctggccgaggtctacatccgcctgacgcgcggccaggactcgctggtgatggacgagggc
ggcggcaatgccggcagcggcaatgccgacttccagctcgaggcgatcgacttcagccgc
ttccagctgccggtgctggccgccagcgccgccgagctggaggcccaccagagcctgctg
gcggatctcgacaaggccagcggcggaaaaagaatctggcaagaagcttga
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