Paucibacter sediminis: PFX98_22730
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Entry
PFX98_22730 CDS
T10150
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pais Paucibacter sediminis
Pathway
pais03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pais00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PFX98_22730 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pais03400
]
PFX98_22730 (xseA)
Enzymes [BR:
pais01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PFX98_22730 (xseA)
DNA repair and recombination proteins [BR:
pais03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PFX98_22730 (xseA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
SKA2
Motif
Other DBs
NCBI-ProteinID:
WIT11672
UniProt:
A0AA95NF04
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All DBs
Position
complement(4896305..4897606)
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AA seq
433 aa
AA seq
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MVEPFKPAPTRLVWGVQALLTAVSDSLASRYANCTVEGELSGFTRAASGHCYFSLKDADG
ATALLRCAMFRRAASLVDFAPGDGHRVEVRGRLALYEPRGELQFVVEAMRRAGAGALYEQ
FLRLKAKLEAQGLFDAERKRPLPAYARRIGVITSTAGAALHDVLTALQRRAPHAEVFVYP
SLVQGPEAPDSLVRALQLANERGDAELLLLCRGGGSLEDLWAFNDERVVRAVAASALPVI
CGVGHETDFSLADLAADLRAPTPTAAAELATPSRSSCLDALDALARTLRRRLEQRLDAAA
QRLDRVALRLARPSDSLTRQRRRLALLAQRWGQVLPRLQGLQAQTLRHQQQRLVRVLPQQ
LERQARRLDTLAQRLAALDPHRVLARGYAWLDDGQGRALSSVRQLQLGAAVHAVLADGQA
ELQVLALKPDAAA
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggttgagcccttcaaacccgctccaacacggctggtctggggcgtgcaggcgctgctg
acggcggtctccgacagcctcgccagccgctatgccaactgcaccgtcgagggcgagttg
tcgggtttcacccgtgccgccagcggccattgctatttcagcctgaaggacgccgatggc
gccacggcgctgctgcgctgcgccatgttccggcgtgccgccagcctggtggacttcgcg
ccgggcgacggccaccgggtcgaggtgcgcggccggctggcgctctatgagccgcgcggc
gagctgcaattcgtcgtcgaggcgatgcgccgcgccggtgccggtgcgctctatgagcag
ttcctgcgcctgaaggccaagctggaggcgcagggcctgttcgatgccgagcgcaagagg
cccctgccggcctatgcacgccgcatcggcgtcatcacctctaccgccggtgcggccctg
catgacgtgctgacggcgctgcaacggcgtgcaccgcatgccgaggtgttcgtctatccc
agcctggtgcaggggccggaggcgcccgacagcctggtgcgcgccctccagcttgccaac
gagcgcggcgatgccgagttgctgctgctgtgccgcggcggcggttcgctggaggacctg
tgggccttcaacgacgagcgcgtggtgcgcgcggtggccgcctcggccctgccggtgatc
tgcggcgtcggccacgagaccgacttcagcctggccgatctggccgccgacctgcgcgcg
cccacccccaccgcggcggcggaactggcgacgccctcgcgctcgtcctgtctggatgcg
ctggacgccctggcgcgcacgctgcggcgccggctcgagcagcgcctggatgccgccgcc
cagcgcctggaccgcgtcgccctgcggctggcgcggccgagcgacagcctgacgcgccag
cgccggcgcctggccttgctggcacagcgctggggtcaggtcttgccgcggctgcagggc
ctgcaggcgcagaccctccggcatcagcagcaaaggctcgtgcgcgtgctgccgcagcag
ctcgaacggcaggcgcgtcggctcgacacgctggcgcagcgcctcgctgcgctggacccg
caccgggtgctggcacgcggctatgcctggctggacgacgggcagggccgggcgctgagt
tcggtacggcagctgcagctcggcgcggccgtgcatgcggtgctggcggacggtcaggcc
gaactgcaggtgctggcgcttaaacccgatgccgcggcctga
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