Paucibacter sediminis: PFX98_23275 Help Entry PFX98_23275       CDS       T10150                                  Symbol hrpA Name (GenBank) ATP-dependent RNA helicase HrpA   KO K03578   ATP-dependent RNA helicase HrpA [EC:5.6.2.6] Organism pais  Paucibacter sediminis Brite Enzymes [BR:pais01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      PFX98_23275 (hrpA) Messenger RNA biogenesis [BR:pais03019]  Prokaryotic type   Bacterial mRNA degradation factors    Other RNA degradation factors     Others      PFX98_23275 (hrpA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Other DBs NCBI-ProteinID:  WIT14549 UniProt:  A0AA95NKJ6 LinkDB All DBs Position complement(5015987..5019805) Genome browser AA seq 1272 aa AA seqDB search MANPLPPISFPESLPVSARREEIARLFNEHQVIIVCGETGSGKTTQLPKIALALGRGRAN TGKLIGHTQPRRIAASSVAKRIAEELNTPLGEIVGYKVRFQDRLQPGASVKLMTDGILLA ETQTDPLLKAYDTLIIDEAHERSLNIDFLLGYLREVLPRRPDLKVVVTSATIDAERFAKH FESAKGPAPVVMVSGRTFPVEQRYRPFEESREYDLNNAITDAVDELWREGGGDVLVFLPG EREIREAAEALRKHHPPGVEILPLFARLSQQEQDRVFEPHGQRRIVLATNVAETSLTVPG IRYVIDPGQARVKRYSYRNKVEQLQIEPISQAAANQRAGRCGRVSNGICIRLYDEKSFNE RPRFTDPEILRSSLAGVILRMKALHLGQVDDFPFIEPPPRKAIADGYQLLAELGAVDEGN ELTTIGRELSKLPLDPRVGRMILEAKSREALAEVLIIASALSGQDVRDRPMEQQQQADEK HKKFDDERSEFMGYLKLWKWLEESRGGQGEHKLSNRRHEQLLRDNFVSPRRVREWRDIYS QLHTVVAEHGWRLNGSAATYEQVHLSMLAGLLGNIGCKSDEDDWYLGARGIKFWRHPGAH LSKKPGRWIIAAELVDTTRLFGRGIANIDVQWIAPLAGHLLKTQLLEPHWEKKAAEVIAL ERATLYGIVIYNNRRVNFGRVDLPAAREIFIREALVNGELPDDMMRRLPFLVHNQKQIAK VEELEHKSRRQDVLVDDELIYNYYDQQLPREVCSGATLEKWVREASRANPRLLHLSRDEL MRHEAAGITSNAFPKTIRLGGVDCTASYLHEPGDQRDGLTVSVPIYALNQVSEERCEWLV PGMLEAKIMALLKSLHQKPRARLVPLPDFVAEFIELNPFAQGSLVEVLLKAVKERSQIAV QRNDFKLEQLQPHLFMNYRVVDEHGRQLGMGRNLAALKAELGAQARSAFQALAQLKLATP PAAPAPAPLAQGGVRAEVLQKPKAREATQASQAYTAWTFGELPELMEIQRGAQTLIGFPA LIDRGTQVEIEVFDEPEVAAAKHRLGLRRLVALQLKEPLKYLEKNIPDLQKMSVFYMGLG TAEELRDQIIGVAVDRAFLAEPLPADEFAFKQRLEEGRTRLNLIAQEVARLTGVILIEYQ AATRKLKDARAPKEVADDIAAQLQRLMPKQFVALTPWAQAQHLPRYLKGITARLDKLRAD PARDAQRLAELRPLEQRYLRRVAELKGTQDARLVDFRWQLEELRISLFAQELRTPQPVSV KRLDKVWAQLNS NT seq 3819 nt NT seq  +upstreamnt  +downstreamnt atcgccaatccgctgccgcccatcagcttccccgaatcgctgccggtctcggcccggcgc gaggaaattgcgcgcctcttcaacgagcaccaggtcatcatcgtctgcggcgagaccggc tcgggcaagaccacccagctgcccaagatcgccctggcgctgggccgcggccgcgccaac accggcaagctgatcggccacacccagccgcgccgcattgccgcttccagcgtggccaag cgcattgccgaggaactgaacacgccgctgggcgagatcgttggctacaaggtgcgcttc caggaccggctgcagcccggtgcctcggtcaagctgatgaccgacggcatcttgctggct gagacccagaccgacccgctgctgaaagcctacgacaccctgatcatcgacgaggcgcat gagcgcagcctcaacatcgatttcctgctcggctatctgcgcgaggtgctgccgcgccgg ccggatctgaaggtggtggtgacctcggcgaccatcgatgccgagcgctttgccaagcat ttcgaatctgccaagggccccgcgccggtggtgatggtctcgggccgcaccttcccggtg gagcagcgctaccggcccttcgaggaatcacgcgagtacgacctcaacaacgccatcacc gacgccgtcgatgagctctggcgcgagggcggcggcgatgtgctggtgttcctgcccggc gagcgcgagatccgcgaggccgccgaggcgctgcgcaagcaccatccgcccggcgtggag atcctgccgctgtttgcgcgcctgtcgcagcaggagcaggaccgcgtgtttgagccgcat ggccagcgccgcatcgtgctggccaccaatgtggccgagacctcgctgacggtgcccggc atccgctatgtgatcgaccccggccaggcgcgggtgaagcgctacagctaccgcaacaag gtcgagcagctgcagatcgagccgatcagccaggcggcggcgaaccagcgcgccggccgt tgcgggcgggtctcgaacggcatctgcatccgtctctacgacgagaagagcttcaacgag cggccgcgcttcaccgaccccgagatcctgcgttcgtcgctggccggtgtgatcctgcgc atgaaggccctgcacctgggccaggtcgacgacttccccttcatcgagccgccgccgcgc aaggcgatcgccgacggctaccagctgctggccgagctgggcgcggtggacgagggcaac gagctcacgacgatcggccgcgagctctccaagctgccgctggacccgcgtgtgggccgc atgattctggaggccaagagccgcgaggcgctggccgaggtgctcatcatcgccagcgcg ctgtcgggccaggatgtgcgcgaccggccgatggagcaacagcagcaggccgacgagaag cacaagaagttcgacgacgagcgctcggagttcatgggctatctcaagctctggaaatgg ctggaggagtccaggggcgggcagggcgagcacaaactttccaaccgccgccacgagcag ctgctgcgcgacaacttcgtctcgccgcgccgcgtgcgcgaatggcgtgacatctactcg cagctgcacaccgtggtggccgagcatggctggcgcctcaacggcagcgcggccacctac gagcaggtgcatctctcgatgctggccggcctcctgggcaatatcggctgcaagagcgac gaggacgactggtacctgggcgcgcgcggcatcaagttctggcgccaccccggcgcgcac ctgagcaagaaaccggggcgctggatcatcgccgccgagctggtggacaccacgcgcctg ttcggccgcggcatcgcgaacatcgatgtgcaatggatcgcgccgctggccggccacctg ctcaagacccagctgctggagccgcattgggagaagaaggccgccgaggtgatcgcgctg gagcgcgccacgctctacggcatcgtcatctacaacaaccggcgcgtgaacttcggccgc gtcgacctgccggcggcgcgcgagatcttcatccgcgaggcgctggtgaatggcgagttg cctgacgacatgatgcgccgcctgcccttcctggtgcacaaccagaagcagatcgccaag gtcgaggaactggagcacaagtcgcgccgccaggacgtgctggtggacgacgagctgatc tacaactattacgaccagcagctgccgcgcgaggtctgctcgggcgccacgctggagaag tgggtccgcgaagccagccgcgccaatccgcgcctgctgcacctcagccgcgacgagctg atgcgccatgaggcggccggcatcaccagcaatgccttccccaagaccatccgcctgggc ggggtggattgcacggccagctatctgcacgagcccggcgaccagcgcgatggcctgacc gtcagcgtgcccatctatgcgctcaaccaggtcagcgaggagcgctgcgaatggctggtg ccgggcatgctggaggccaagatcatggccctgctcaagagcctgcaccagaagccgcgc gcgcgcctggtgccgctgccggactttgtggccgagttcatcgagctcaacccctttgcc cagggcagcctggtcgaggtgctgctgaaggcggtgaaggagcgcagccagatcgccgtg cagcgcaatgacttcaagctcgagcagctgcagccgcatctgttcatgaactatcgcgtg gtggacgagcatggccgccagctgggcatgggccgcaatctcgcggccctcaaggccgag ctcggtgcgcaggcgcgttcggccttccaggccctggcccagctcaagctggccacgccg ccggcggcgcccgcaccggcaccgctcgcccagggcggcgtgcgggccgaagtgcttcag aagcccaaggcgcgcgaggccacccaggccagccaggcctacaccgcctggacctttggc gagctgcccgagctgatggaaatccagcgcggcgcgcagaccctgatcggcttcccggcc ctgatcgatcgcggcacgcaggtggagatcgaggttttcgacgagcccgaggtggccgcc gccaagcaccgcctgggtctgcgccggctggtggccttgcagctcaaggagccgctcaaa tacctggagaagaacatccccgatctgcagaagatgtcggtgttctacatgggcctgggc acggccgaggagctgcgcgaccagatcatcggcgtggcggtggaccgcgccttcctggcc gagccgctgccggcggacgagttcgccttcaagcagcggctggaagaggggcgcacgcgc ctgaacctgatcgcgcaggaggtggcgcgcctgaccggggtgatcctgatcgagtaccag gccgccacgcgcaagctcaaggatgcgcgcgcgcccaaggaggtggccgacgatatcgcc gcgcagctgcagcgcctgatgcccaagcagttcgtcgcgctgaccccctgggcccaggcc cagcatctgccgcgctacctcaagggcatcaccgcgcgcctggacaagctgcgcgccgac ccggcccgcgatgcccagcgcctggccgagctgcgcccgctggagcagcgctatctgcgc cgcgtggccgagctcaagggcacgcaggatgcgcgcctggtggacttccgctggcagctg gaggagttgcgcatcagcctgtttgcacaggaactgcgcaccccccaaccggtcagcgtg aagcgtctggacaaggtctgggctcagctgaatagctga

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