Paucibacter sediminis: PFX98_23395
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Entry
PFX98_23395 CDS
T10150
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
pais Paucibacter sediminis
Pathway
pais03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
pais00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PFX98_23395 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pais03032
]
PFX98_23395 (dnaB)
Enzymes [BR:
pais01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PFX98_23395 (dnaB)
DNA replication proteins [BR:
pais03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PFX98_23395 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
DUF5410
Motif
Other DBs
NCBI-ProteinID:
WIT11793
UniProt:
A0AA95NGK7
LinkDB
All DBs
Position
complement(5049017..5050438)
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AA seq
473 aa
AA seq
DB search
MSAIISPNPGSPDRSDDEVSRLRVPPHSVEAEQSVLGGLLIDNSAWDRAGDLLSDSDFYR
FEHKQIFAAVGKLINAGKPADVVTVFEELTSLGKAADCGGLKYLNDLAQSVPSAANLRRY
AEIVRERAILRKLVSASDEIATAALAPQGRAVTQILDEAEGKIFRIGEEGSRSRQGFQSM
DNLVVQLIDRVNELAENGAEDVTGVRTGFFDLDRMTAGLQPGDLIVLAARPSMGKTAFAV
NIAENVAINEGLPVVIYSMEMGAAQLALRMVGSIGRIDQGHLRTGRLADDEWSRLSEAVD
KLGKSSIFIDESPGLSPSEVRARARRQARICGKLGLIVIDYLQLMSGNGGNEENRATVIG
EISRGLKALAKELQCPVIALSQLNRSVETRPDKRPMMSDLRESGAIEQDADIIMFIYRDE
YYTKDECKEPGVAEIIIAKQRNGPVGTVKLAFQRMHTKFENLAPGYSGGGDEY
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgatcatttcccccaatcccggatcccccgatcgcagcgatgacgaggtgtcg
cgcctgcgcgtgccgccgcactcggtggaagccgagcaaagcgtgctgggcggcctgctg
atcgacaacagcgcctgggatcgggccggcgatctgctgtccgacagcgatttctaccgc
ttcgagcacaagcagatctttgccgcggtgggcaagctcatcaacgccggcaagcccgcc
gacgtggtgacggtgttcgaggagctgacctcgctgggcaaggcggccgattgcggcggc
ctcaaatacctcaacgacctggcgcagagcgtgccaagtgccgcgaatctgcgtcgttat
gccgagatcgtgcgcgagcgcgccatcctccgcaagctggtcagcgccagtgacgagatc
gccaccgcggcgctcgcgccgcagggccgcgcggtgacccagatcctcgacgaggccgag
ggcaagatcttccgcatcggcgaagagggctcgcgcagccgccagggcttccagagcatg
gacaacctggtggtgcagctgatcgatcgcgtcaacgaactggccgagaacggcgccgag
gacgtgaccggcgtgcgcaccggcttcttcgacctggaccgcatgaccgccggcctgcag
cccggcgacctgatcgtgctggcggcgcgcccctcgatgggcaagacggcgttcgccgtc
aatatcgccgagaacgtggccatcaacgaaggcctgccggtggtcatctactcgatggaa
atgggcgcggcccagctggcactgcgtatggtgggctcgatcggccgcatcgatcagggc
catctgcgcaccggccgcctggccgatgatgaatggagccggctctccgaggcggtggac
aagctcggcaagtccagtatcttcatcgacgagagccccggcctctcgcccagcgaggtg
cgcgcgcgtgcgcgccgccaggcccgcatctgcggcaagctgggcctgatcgtgatcgac
tatttgcagctgatgagcggcaacggtggcaacgaggaaaaccgtgctaccgtgatcggc
gaaatctcgcgcggactcaaggccctggccaaggagctgcaatgcccggtgatcgcgctc
tcgcagctcaaccgttcggtggaaacgcggcccgacaagcgccccatgatgtccgacctg
cgcgaatccggcgccatcgagcaggatgccgacatcatcatgttcatctaccgcgacgag
tactacaccaaggacgagtgcaaggagccgggtgtggccgagatcatcatcgccaagcag
cgtaacggcccggtgggcacggtgaagctggccttccagcgcatgcacaccaagttcgag
aacctggcacccggctacagcggcggcggcgacgagtactga
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