Paucibacter sediminis: PFX98_23635
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Entry
PFX98_23635 CDS
T10150
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
pais Paucibacter sediminis
Brite
KEGG Orthology (KO) [BR:
pais00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pais03009
]
PFX98_23635
Enzymes [BR:
pais01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
PFX98_23635
Ribosome biogenesis [BR:
pais03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PFX98_23635
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
WIT11838
UniProt:
A0AA95NGN1
LinkDB
All DBs
Position
complement(5099722..5100663)
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AA seq
313 aa
AA seq
DB search
MDAVEADVEVETRVAQVDEGWHLQRLDKFLVQLAPEFSRNHLQGLIERACVSVNGVQAAS
AAQKLRAGQQVRVSLQPTEESKAFRAEPMDLQVVFEDEHVLVLNKPAGVVVHPAAGNWSG
TIMNGLLAHHAPAAALPRAGIVHRLDKDTSGLMVVGKTLAAVTALSRMIAAREVHREYLA
LAAGRVPGSLVIEAPLARDPVSRVKMAVVASGKPSRTDVFCLGWSEGISALHCVLHSGRT
HQIRVHLASRGFPLVADALYGGAPALGMKRQALHAARLSFAHPIGGEALRFDAQLPQDLA
SAWALAGLPAPEF
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggatgcggttgaggccgacgtcgaggtggagacgcgcgtcgcgcaggtggatgagggc
tggcacttgcagcgcctcgacaaattcctcgtgcagctggcgccggagttctcgcgcaac
catctgcagggcctgatcgagcgcgcctgcgtcagcgtgaatggcgtgcaggccgcctcg
gccgcgcagaagctgcgcgccggccagcaggtgcgggtgagcctgcagcccaccgaggaa
agcaaggccttccgtgccgagcccatggacctgcaggtggtgttcgaggacgagcatgtg
ctggtgctcaacaagcccgcgggcgtggtggtgcacccggccgccggcaattggtcgggc
accatcatgaacgggctgctggcgcatcacgccccggccgcggcgctgccgcgtgccggc
atcgtgcatcgcctggacaaggacacctcgggcctgatggtggtgggcaagacgctggcg
gcggtgacggcgctgtcgcgcatgattgcggcgcgcgaggtgcatcgggagtacctggcg
ctggccgcggggcgggtgcccggaagcctggtgatcgaggcgccgctggcgcgcgacccg
gtctcgcgcgtgaagatggccgtggtggccagcggcaagccctcgcgcaccgacgtgttc
tgcctgggttggtccgagggcatctcggccctgcattgcgtcctgcacagcgggcgcacc
caccagatccgcgtgcatctggcctcgcggggctttccgctggtggccgacgcactctac
ggcggcgcgcccgccttgggcatgaagcgccaggccctgcatgcggcacggctgagcttt
gcccatccgatcggtggcgaggccctgcgctttgatgcgcaattgccacaggatttggca
tctgcctgggctcttgctggcttgcccgcaccggagttctga
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