Pantoea ananatis AJ13355: PAJ_0250
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Entry
PAJ_0250 CDS
T01969
Symbol
dbpA
Name
(GenBank) ATP-independent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
paj
Pantoea ananatis AJ13355
Brite
KEGG Orthology (KO) [BR:
paj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paj03009
]
PAJ_0250 (dbpA)
Enzymes [BR:
paj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PAJ_0250 (dbpA)
Ribosome biogenesis [BR:
paj03009
]
Prokaryotic type
rRNA helicases
PAJ_0250 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
P-loop_SecA
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
BAK10330
UniProt:
A0A0H3L0R8
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All DBs
Position
complement(312683..314002)
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AA seq
439 aa
AA seq
DB search
MGYTSMTPVQAATLPAILDGRDVRAQAKTGSGKTAAFGIGLLQHIDSAHFQTQALILCPT
RELADQVSNVLRQLARFTRNIKILTLCGGQPMSAQRDSLVHAPHIVVGTPGRILDHIKRE
TLKLESLRTLVLDEADRMLEMGFRDDMETIIAATPASRQTLLFSATWPEGIAALSQRFQR
EALSVVTEEVSELPAIEQQFIEASHGEKLSLLISLLSERQPSSCVVFCNTKRECDDIAAA
LNARDISALPLHGDLEQRDRERVLIRFANGSGRVLVATDVAARGLDIKLLSLVVNYQLAW
DPEVHLHRIGRTARAGEQGAAVSFVAADEMARAHALEDFLQQKLPWVAASSLKKSSKALP
AAMMTLCIDGGRKAKIRPGDILGALTGEAGYRADQIGKIDLTATHAYVAIEAAQAKQALV
KLKQGKIKGKTCRAVLLKD
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgggctataccagcatgactccggttcaggccgccacgctgcccgcgattttagacgga
cgcgacgtgcgtgcgcaggccaaaaccggcagcggtaaaaccgccgcatttggcattggg
ttgctgcagcatatcgacagcgctcactttcagacgcaggcgctgattttatgcccgacc
cgggaactggccgatcaggtcagtaacgtcctgcggcagttagcccgcttcacgcgcaac
attaaaatcttaaccttatgtggcggccagcctatgagcgcccagcgcgattcgctggtg
catgcgcctcatatcgtggtcggcacaccgggccgtattctggatcacattaagcgtgag
acgctgaagctggagagcctgcgtacgcttgtactggacgaagccgatcgcatgctggaa
atgggcttccgcgacgatatggaaacgattatcgctgccacgccagcatcacgtcagacg
ctgctgttctccgcgacctggccggaaggcattgccgccctgagccagcgctttcagcgt
gaggcgctgagcgtggtcacggaagaagtgagtgaactccctgctatcgagcagcagttt
attgaagccagccacggtgaaaagctgtcactgttgatcagtctgctcagcgaacgccag
ccctcttcctgcgtggtgttctgtaataccaagcgggagtgcgatgatattgcggctgcg
ctcaatgcacgcgatatcagcgccctgcccctgcatggcgatctggaacaacgcgatcgc
gaacgggtgctgatccgttttgccaacggcagcggccgcgtattagtcgcaaccgatgtt
gcggcccgtgggctggacatcaagttactgtcgctggtggtaaactatcagctggcctgg
gatccggaagtgcacctgcatcgcattggccgcaccgcgcgcgctggcgaacagggcgca
gcggtgagctttgtcgctgcagacgaaatggcacgcgctcatgctcttgaagacttcctg
caacagaagctgccctgggttgcggccagttcgttaaagaaaagcagtaaagcgttaccg
gccgccatgatgacgctctgcattgatggcgggcgtaaagccaaaatccgccccggcgat
atcctgggggcactgacgggcgaggcgggttaccgggctgaccaaatcggtaaaatcgat
ctcaccgcgactcatgcatatgtggcgatagaagcggcccaggctaagcaggccctggtc
aagctcaagcagggcaaaattaaaggcaagacctgccgcgcagtcctgttaaaagattaa
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