Pantoea ananatis AJ13355: PAJ_0277
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Entry
PAJ_0277 CDS
T01969
Symbol
sbcD
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
paj
Pantoea ananatis AJ13355
Brite
KEGG Orthology (KO) [BR:
paj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paj03400
]
PAJ_0277 (sbcD)
DNA repair and recombination proteins [BR:
paj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PAJ_0277 (sbcD)
Archaeal homologous recombinant proteins
PAJ_0277 (sbcD)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
BAK10357
UniProt:
A0A0H3KSH8
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Position
complement(344011..345207)
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AA seq
398 aa
AA seq
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MRIIHTADWHLGQFFYNKSRAAEHQAFLDWLLIQIEQHQVDALIVAGDLFDTGTPPSYAR
EMFNRFVVALQPSGCQLVVLAGNHDSVATLNESRELLACLNTRVVATPQESDDVMILTTR
QGEPGALLCAIPYLRPRDIMRSQAGQSGRDKQLSLLEAISAHYQRSFAAAQALNMSLPIV
ATGHLTALGVSKSDSVRDIYIGTLDAFPASAFPPADYIALGHIHRAQRVANSDHIRYSGS
PIPLSFDELGSEKSVCLLTFSPRGLETLTLPVPTFQPMQMLKGSLAQISEQLAHLSPPSG
EKPVWLDIEVTTQEYLSDLQRQVEALTADLPVEVLLLRRSREQRQHSLAQTDNETLSELK
VEEVFARRLALNDELDDKQIVQVTTLFKQTLADLEANP
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattattcacaccgcggactggcacctggggcagttcttctataacaagagccgc
gccgccgagcaccaggcctttcttgactggctgttaatacagatcgaacagcatcaggtc
gatgcgctgattgtggcgggtgacctgtttgataccggtacgccgcccagctatgcgcgt
gaaatgtttaaccgcttcgtggtggcgttacagcccagcggctgtcaactggtggtgctg
gcgggcaatcatgactcggtggcaacgctgaatgaatcgcgcgaactgctggcctgtctg
aacacccgggtcgttgccacgccgcaggagagtgacgacgtcatgatcctgacaacccgt
cagggtgaacccggcgcgctgctgtgcgcgattccctatctgcgcccgcgcgacattatg
cgcagccaggccggtcagtctggacgggataaacagctcagcctgctggaggccatcagc
gcccattatcagcgcagctttgcggcggcacaggcgctgaacatgtccctgccgatcgtg
gcgaccggccaccttaccgcccttggcgtcagcaaaagtgactccgtgcgcgatatctac
atcggcacgctggatgcgtttcctgcctcggcgtttccgccggccgattacatcgccctt
ggacatattcatcgcgctcagcgcgtcgcgaacagcgaccatattcgctacagcggctcc
cctattccgctgagctttgacgagctgggcagcgaaaaaagtgtctgtctgctgactttc
agcccgcgcggactggaaaccctgaccctgccggttcccaccttccagccgatgcagatg
cttaaaggctccctggcgcaaatcagtgagcagctcgcccatctttcccctcccagcgga
gagaagccggtctggctcgatatagaagtcaccacccaggagtacttaagcgatctgcag
cgccaggttgaagcgctgacggcagatttaccggtggaagtgctgctgttacgccgcagt
cgtgaacagcgccagcacagcctggcgcaaacggataacgaaaccctgagcgaacttaag
gtcgaagaggtttttgcccgacgtctggcgcttaatgacgagcttgatgacaagcagatc
gtccaggtcacgaccctgtttaagcagacgctggccgacctggaggcgaacccatga
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