Pantoea ananatis AJ13355: PAJ_0735
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Entry
PAJ_0735 CDS
T01969
Symbol
ycdC
Name
(GenBank) putative HTH-type transcriptional regulator YcdC
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
paj
Pantoea ananatis AJ13355
Brite
KEGG Orthology (KO) [BR:
paj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paj03000
]
PAJ_0735 (ycdC)
Transcription factors [BR:
paj03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
PAJ_0735 (ycdC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
Motif
Other DBs
NCBI-ProteinID:
BAK10815
LinkDB
All DBs
Position
874555..875190
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AA seq
211 aa
AA seq
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MKKEQSVPTRRSVAVAAKRAAILEAALSFFSQFGIHGTRLEKVADRAGVSKTNLLYYYPS
KEALYIAVLKEILDVWLAPLRALSHDQDPLRAIRHYIRLKLEVSRDHPQASRLFCLEMLQ
GAPLLKGELAGDLKQLMDDKTAIIQRWIAEGRLAGIQPQHLIFMLWATTQHYADFASQVE
AITGNRLTNPLFFEETVENVQRIIIEGIRVR
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggaacaatcagtgcccacgcgccgctcagtggccgtcgctgccaaacgggcg
gctattctggaggccgcgctgagctttttttcccagtttggcatccacggtacgcggctg
gaaaaagtcgctgaccgcgccggtgtctctaaaacgaatttgctgtactactatccttcc
aaagaagcgctctatattgctgtgttgaaagagatcctggatgtctggctggcgcccctg
cgtgcactgagccacgatcaggatcctttgagagccattcggcactatatccgcctaaaa
cttgaagtctcgcgggaccatccgcaggcatcaaggctgttttgcctggaaatgctccag
ggggcgcccctgttgaaaggtgaactggcgggggatttaaaacaacttatggatgataaa
acagcgattatacagcgctggatagccgaaggacggctggcgggtattcagccccaacac
ctgatttttatgctctgggcaaccacgcagcactacgccgattttgccagtcaggttgaa
gccattacgggaaacaggctcactaatccgctgttttttgaagaaacggtagagaacgtt
cagcgcattattattgaaggtattcgggtgcgttaa
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