Pantoea ananatis AJ13355: PAJ_1364
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Entry
PAJ_1364 CDS
T01969
Symbol
rnb
Name
(GenBank) exoribonuclease II Rnb
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
paj
Pantoea ananatis AJ13355
Brite
KEGG Orthology (KO) [BR:
paj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paj03016
]
PAJ_1364 (rnb)
Enzymes [BR:
paj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
PAJ_1364 (rnb)
Transfer RNA biogenesis [BR:
paj03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PAJ_1364 (rnb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
ODP
Motif
Other DBs
NCBI-ProteinID:
BAK11444
UniProt:
A0A0H3KW61
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All DBs
Position
1652117..1654051
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKEKLHSQTPRAEGVVKGTEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
VAIVHSDKDRESAEPETLVEPFLSRFVGRVQKKDDRLSIVPDHPLLKDAIQCRPVRGLSH
DFQNGDWAVAEMRRHPLKGDRGFYAELTEFIVKADDHLAPWWVTLSRHNLEREAPEIGFG
EMLDESLTREDLTALDFVTIDSASTEDMDDALYAEALDDGALRLTIAIADPTAYVAEGSE
LDKLAAQRAFTNYLPGFNIPMLPRELSDDVCSLRPDVRRPVLACRVTVAQDGSLADDVQF
FAAWIESKAKLVYDEVSDWLENSGEWQPQSDAIADQIRLLHRLCLSRAEWRQNHALVFKD
RPDYRFLLGEKGEVLEIVAEPRRIANRMVEEAMILANICAANVLREKLGFGIYNVHAGFD
AANAEQAAAVLATHGITADPQAITTLDGFRVLRRELDAQPTQFLDSRIRRFQTYAEITTE
PGPHFGLGLEAYATWTSPIRKFGDMINHRLLKAIVRGEPIGRPDDALTVTMSERRRLNRM
AERDVGDWLYARYLSPFAATDRKFSAEIIDVSRGGMRVRLLENGAVAFIPAPFLHAVRDE
LVCSQESGTVQIKGDVVYRVSDVIDVTIAEVRMETRSVVARPAA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgttccaggataatccgctgcttgcgcagcttaaagagaagcttcactcgcaaacgccc
cgtgcagaaggcgttgttaaaggcaccgaaaagggattcggctttctggaagtcgatgca
cagaaaagttatttcatcccgccgccacagatgaaaaaagtgatgcatggcgaccgtatc
gttgccatcgtccacagcgataaagatcgcgaaagtgccgagcctgaaacgctggtcgag
ccctttctgagccgttttgttggccgcgtgcagaaaaaagatgaccgcctttctatcgtg
cccgatcatcctctgctcaaagacgcgattcagtgtcgtccggtccgtggactgagccat
gatttccagaatggcgactgggccgtggcagaaatgcgtcgccatcccttaaaaggcgac
cgtggcttttatgccgaactcaccgaatttatcgttaaagccgacgaccaccttgcaccg
tggtgggtgacactgtcacgtcataatctggagcgtgaagcgccagaaatcggctttggc
gagatgctggacgaaagcctgacgcgtgaagacctgaccgcgctggattttgtgaccatc
gacagcgccagcacggaagatatggacgatgcgctgtatgctgaagcgctggacgatggc
gccctgcgtctcactatcgccattgccgatccgaccgcttatgttgccgaaggcagcgag
ctggataagctggcggcgcagcgtgcctttaccaactacctgccgggcttcaatattccc
atgctgccgcgcgagctgtctgacgatgtctgctcgctgcgccctgacgtgcgtcggccg
gttctggcctgccgcgtgaccgtggctcaggatggaagcctggcggacgatgtgcagttc
tttgcggcctggatcgagtccaaagccaagctggtgtacgacgaggtttcagactggctg
gaaaacagtggcgaatggcaaccacagagcgacgcgattgctgaccagattcgtctgctg
caccgtctgtgcctgtcacgcgccgagtggcgtcaaaaccacgcgctggtgtttaaagat
cgcccggactatcgtttcctgctgggcgaaaaaggcgaagtgctggaaatcgtcgccgaa
ccgcgccgcatagcgaaccggatggttgaagaagcgatgattctggcgaatatctgtgcc
gccaacgtcctgcgcgaaaagctgggctttggtatctacaacgtccatgccggttttgac
gcagcaaacgccgaacaggccgccgctgtcctggcaactcacggcatcacggccgatccg
caggcgatcaccacgctcgacggtttccgcgtactgcgtcgtgagctggatgcgcagcct
actcagttcctcgacagccgcattcgtcgtttccagacctatgcagagatcaccaccgag
ccgggcccgcactttggtttggggctggaagcctatgccacctggacctcaccgattcgt
aagtttggcgatatgatcaaccatcgtctgctgaaggcgatcgtgcgcggcgaacccatc
ggccgtccggacgatgcgctgacagtcaccatgagcgagcgtcgtcgtctaaaccgcatg
gccgagcgcgacgtgggtgactggctttatgcccgctatctgtcgccgtttgccgcaact
gaccgcaagtttagcgcagaaatcattgatgtatcgcgtggtggcatgcgcgtccgtctg
ctggaaaatggcgccgtcgcgtttattcctgcgccgttcctgcatgccgtgcgcgatgag
ctggtgtgcagccaggaaagcggtacggtacagataaaaggtgacgtggtttaccgcgta
tccgacgtgattgacgtgaccattgcggaagttcgcatggaaacacgcagcgttgttgca
cgccctgccgcctaa
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