Pantoea ananatis AJ13355: PAJ_1379
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Entry
PAJ_1379 CDS
T01969
Symbol
topA
Name
(GenBank) DNA topoisomerase I TopA
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
paj
Pantoea ananatis AJ13355
Brite
KEGG Orthology (KO) [BR:
paj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paj03032
]
PAJ_1379 (topA)
03400 DNA repair and recombination proteins [BR:
paj03400
]
PAJ_1379 (topA)
Enzymes [BR:
paj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PAJ_1379 (topA)
DNA replication proteins [BR:
paj03032
]
Prokaryotic type
DNA Topoisomerases
PAJ_1379 (topA)
DNA repair and recombination proteins [BR:
paj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PAJ_1379 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
LRV_FeS
Motif
Other DBs
NCBI-ProteinID:
BAK11459
UniProt:
A0A0H3KWA7
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Position
complement(1670765..1673362)
Genome browser
AA seq
865 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGSGYVVKSSVGHIRDLPTSGSTAKKSAETSTDKKVKKVK
KDEKAALVSRMGVDPYHGWEADYQILPNKEKVVAELKALAENADHIYLATDLDREGEAIA
WHLREVIGGDDKRFSRVVFNEITKNAIRQAFDTPGELNIDRVNAQQARRFMDRVVGYMVS
PLLWKKVARGLSAGRVQSVAVRLVVEREREIKAFVPEEYWELSANLTTPKGDDLAMDVTH
AGDKPFRPVNHEQTHAALALLEKARFAVTDREDKPTSSKPGAPFITSTLQQAASTRLGFG
VKKTMMMAQRLYEAGHITYMRTDSTNLSQDAVSMVRGYIEGNFGKKYLPDNANTFASKEN
SQEAHEAIRPSDVDVVAEQLKDMEADAQKLYQLIWRQFVACQMTPAQYDSTTLTVTAGDY
KLKAKGRTLRFDGWTKVMPALRKNDEDRTLPPVNVGDELSLQALLPSQHFTKPPARFSEA
SLVRELEKRGIGRPSTYAAIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRELMNY
DFTAHMESSLDQVANNQAEWKAVLDRFFSDFSQQLEQAEKDPEEGGMQPNQMVLTTIDCP
TCGRKMGIRTASTGVFLGCSGYALPPKERCKQTINLIPENEVLNILEGDDAETNALRARR
RCQKCGTAMDSYLIDNGRKLHVCGNNPECDGYEIEEGEFRIKGYDGPVVECEKCGSEMHL
KMGRFGKYMACTNDDCKNTRKILRNGDVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVF
LAANTFPKSRETRAPLVEELQRFHDRLPEKLKYLAEAPATDPEGNKTLVRFSRKTKQQYV
ASEKEGKATGWSAFYIDGKWQEAKK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagcactcgttattgttgagtccccggcaaaggccaaaacaatcaataaatac
ctgggcagtggctacgtggtgaaatccagcgtgggccatatccgggatctgccgaccagt
ggttcaaccgccaaaaaaagtgctgaaacctcgacagataaaaaagtcaaaaaagtaaag
aaggacgagaaggccgcgctggtcagccgtatgggcgttgatccctatcatggctgggaa
gcggactaccaaatcctgccaaataaagagaaggtggtcgctgaactcaaagccttggct
gaaaacgctgaccacatttatctcgcaaccgaccttgaccgcgaaggggaagccattgcc
tggcacctgcgggaagtcatcggcggcgacgacaaacgctttagccgcgtggtgtttaac
gaaatcaccaaaaatgcgatccgtcaggcgtttgatacgccgggcgaactgaatattgac
cgcgttaatgcgcaacaggcacgccgctttatggaccgtgttgtgggctacatggtttcg
ccgctgttgtggaaaaaagtcgcgcggggattatctgcgggccgcgtacagtcggttgcc
gtgcggttagtggttgagcgcgagcgcgagatcaaagcgtttgttcctgaagagtattgg
gaactcagcgctaacctgacgacgccgaagggcgatgacctggcgatggacgtgactcac
gcgggtgataagcctttccgtccggtcaatcacgaacagacgcatgccgccctggcgctg
cttgaaaaagcccgctttgccgttaccgatcgcgaagataagccaaccagcagtaaaccc
ggtgcgccatttattacgtctacgctacagcaggccgcgagtacccgcctgggctttggc
gtcaaaaaaaccatgatgatggcacagcgactttatgaagcgggtcatatcacctatatg
cgtaccgactcgaccaatctgagtcaggatgcggtttccatggtgcgcggctatatcgaa
gggaatttcggtaaaaagtatctgccagacaacgccaatacctttgccagcaaagagaat
tcacaggaagcacacgaagcgattcgtccttctgacgtggatgtggtggctgagcagctc
aaagatatggaagcggatgcacaaaagctgtatcagctcatctggcgtcagtttgttgcc
tgccagatgacacctgctcagtatgattcaaccacgctgacggtaacagcgggggattac
aaactgaaggccaaagggcgcacgctgcgttttgacggctggactaaggtcatgcccgcc
ctgcgcaagaacgatgaagatcgcaccttgccgccggtgaacgtgggtgacgaactgagc
ctgcaggcattgctgccaagccagcactttaccaagccaccggctcgcttcagcgaagcc
tcgctggtgcgcgaactggaaaaacgtggaattggccggccttcgacctatgccgctatt
atctccaccattcaggaccggggctatgtccgggttgagaatcgccgtttttatgccgaa
aaaatgggtgaaatcgtcaccgatcgcctggaagaaaatttccgcgaactgatgaattac
gatttcaccgcgcacatggaaagcagcctcgaccaggttgccaacaaccaggcggaatgg
aaagcggtgcttgatcgcttcttctcagacttcagccagcagctggaacaggcggagaaa
gatcctgaagaaggcggcatgcagccaaaccagatggtgttaaccaccattgactgcccc
acctgcggccgcaaaatgggcattcgcacggccagtaccggcgttttcctgggatgttca
ggttacgcactgccgccgaaagagcgctgtaagcaaaccattaacctgattccagaaaat
gaagtgctgaatattctggaaggggacgatgctgaaaccaatgcgttacgcgcacgtcgt
cgttgccagaagtgcggcacggcaatggacagctacctgattgataacggacgcaaactg
cacgtgtgtggtaacaaccctgaatgcgatggctatgaaatcgaagaaggcgagttccga
atcaaaggttacgacggtccggtggttgagtgcgaaaagtgcgggtctgaaatgcacctg
aagatggggcgtttcggtaagtacatggcctgtaccaacgatgactgcaagaatacacgt
aaaattttgcgtaatggcgatgtggcaccgccgaaagaagatccggtgccgctgccagaa
ctgccgtgtgaaaagtcagatgcctactttgtgctgcgcgacggtgcggcgggtgtgttc
ctggccgctaacacctttccaaagtcacgtgaaacccgtgcaccgctggtggaggaactg
caacgtttccacgatcgcctgcctgagaagttgaaatacctggccgaagcgccagcaacc
gatccggaaggcaataaaacgttggtgcgctttagccgtaaaacgaaacaacagtacgtt
gcctctgaaaaagagggtaaagcgacgggctggtcagcgttttacattgacggcaagtgg
caggaagcgaaaaagtaa
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