Pantoea ananatis AJ13355: PAJ_2193
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Entry
PAJ_2193 CDS
T01969
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
paj
Pantoea ananatis AJ13355
Brite
KEGG Orthology (KO) [BR:
paj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paj03009
]
PAJ_2193 (srmB)
Enzymes [BR:
paj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PAJ_2193 (srmB)
Ribosome biogenesis [BR:
paj03009
]
Prokaryotic type
rRNA helicases
PAJ_2193 (srmB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
WSD
CMS1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BAK12273
UniProt:
A0A0H3KZ11
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All DBs
Position
2654378..2655706
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AA seq
442 aa
AA seq
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MTVTTFSELELDESLLEALQEKGYTRPTAIQAAAIPPALEGRDVLGSAPTGTGKTAAYLL
PVLQHLLDFPRKKSGPPRILILTPTRELAMQVADQARELAKHTHLDIATITGGVAFMNHA
EVFSENQDVVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETIAGETRW
RKQTMLFSATLEGEHIKDFAERLLNEPVELEADPSRRERKKIQQWYHRADDLEHKTKLLV
HLLKQPEVTRSIVFVRKRERLHELVSWLHDAGIRTSYLEGEMVQAKRNEAIKRLVEGRVN
VLVATDIAARGIDVDDVSHVINFDMPRTADTYLHRIGRTGRAGRKGIAISLVEAHDHLLL
GKVSRYVDEPIKARVIDELRPVTRAPSAKTTGKPSKKALAKRAEKKAKEEEKPRVKKRHR
DLKNVGKRRKPSGSTPGSESAE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtaaccacattttccgaacttgaactcgacgaaagcctgcttgaagcgctgcag
gagaaaggctatacgcgcccgacagcaattcaggctgctgccattccccccgcgctggag
ggccgcgacgttctgggttcggcacctaccgggaccgggaaaaccgccgcgtatttatta
ccggtgttgcagcacctgctcgattttccgcgcaagaagtctggcccgccgcgtatttta
attttaacgccaacccgtgagctggccatgcaggttgccgaccaggcacgggaactggcg
aaacacacgcatctggatatcgccaccatcactggcggcgtggccttcatgaaccacgct
gaagtgtttagcgaaaatcaggatgtcgtggttgccaccaccggtcgtctgctgcaatac
attaaagaagaaaactttgactgccgcgccgtagaaacgctgatcctggatgaagccgac
cgcatgctggacatgggctttgctcaggatattgaaaccatcgcgggcgaaacgcgctgg
cgcaaacagacgatgctgttttctgccacgctggaaggcgagcatatcaaggattttgcc
gagcgcctgctgaatgaaccggttgaactggaagccgatcccagccgtcgcgagcgtaag
aagatccagcagtggtatcaccgcgccgacgatcttgagcacaagacaaagctgctggtt
catctgttaaagcagccggaagtgacccgttcaattgtgtttgtgcgcaagcgtgaacgt
ctgcacgagctggtcagctggctgcatgatgccggtatccgcaccagctaccttgaaggt
gaaatggtgcaggctaagcgcaatgaggcgattaaacgcctggtcgaggggcgcgtcaat
gtgctggtggcgaccgatattgccgcacgtggtattgacgtcgacgatgtcagccacgtc
atcaacttcgatatgccgcgcaccgctgacacctatttgcaccgcattggccgtactggc
cgggccggtcgtaaaggtatcgcgatttcgctggttgaagcacacgaccatctgctgctc
ggtaaagtcagccgctacgttgatgaaccgattaaagcccgggtgattgacgagctgcgt
cctgttacgcgcgcgccttcggcgaaaacgacgggaaaaccgtcgaaaaaggcgcttgcc
aagcgtgcagagaaaaaagcgaaagaagaagagaaaccgcgggttaaaaagcgtcaccgt
gacctcaaaaacgtgggcaagcgtcgcaagccgagcggcagtacgccgggcagcgagagt
gcggaataa
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