Pantoea ananatis AJ13355: PAJ_2382
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Entry
PAJ_2382 CDS
T01969
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V beta chain RecB
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
paj
Pantoea ananatis AJ13355
Pathway
paj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PAJ_2382 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paj03400
]
PAJ_2382 (recB)
Enzymes [BR:
paj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PAJ_2382 (recB)
DNA repair and recombination proteins [BR:
paj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PAJ_2382 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_25
DUF4378
AAA_11
Pox_P4B
Motif
Other DBs
NCBI-ProteinID:
BAK12462
UniProt:
A0A0H3L3N2
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All DBs
Position
complement(2875793..2879332)
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AA seq
1179 aa
AA seq
DB search
MMQSRPESLNPLTLPLNGERLIEASAGTGKTFTIGLLYLRLLLGLGGENAWRRPLSVEEI
LVVTFTEAATAELRGRIRDNIHQLRLACVRGKSHNPMHQQLMVQIPDLPQAASQLLAAER
QMDEAAIFTIHGFCQRMLNLNAFESGMLFEQELIENEQTLLRQATADFWRRQCYPLSLDV
ARVIAAEWSGPDSLLTTLRPWLQGESPTLRRPPRPEETLASRHAANLERINALKQQWQAA
SADVEGLISASGVDKRSYSSKHLPNWVAKVTQWALDDTLDYQLPKELERFGQQVLHEKTK
KGEAPQHALFDAVDRFLAEPLTLRDVIIWQALTEVREAVQREKRQRALLGFDDLLSRLDE
ALQQPGGALLAETIRGRFPVALIDEFQDTDPQQYRIFRTLYLHQPELALLLIGDPKQAIY
AFRGADIFTYLRARSEVSAHYTLDTNWRSSPDMVDSVNRLFSQVDSPFLFSSIPFLPVSP
AAPNQALKLIYQQQPQPALRFWLQPGEGVGVSDYQQFMAQQCAADISRWLVAGQQGQALI
GKGDALQPVKASDITVLVRSRNEASLIRDALNSLSIPSVYLSSRDSVYTTPEARELLWLL
QAVQSPEQERLLRSALATSIFAIDAAELDALAQNERHWDALVEQFVSWQQIWHQRGVLPM
LRDVMITRQLAENMLASDNGERRLTDLMHLGELLQEAAVQLDSTHALVRFLAQQIARPDS
QAASQQLRLESDRHLVQIVTIHKSKGLQYPLVWLPFAAGFREAASALYHDRESFAAMLDV
QGDEYSLTLAEEERLAEDLRLLYVALTRSVHHCSVGIAPLIKGARKKAGESDLHKSALGY
LVQRGEIADAAQLSQHLQALEGAGIEVISSALQPGAIWHEGLGSNDALSSREMTRALADS
WRVTSYSGLQQHGSSPLLDALPKFDIDAAGETADEEDTLLTPHHFPRGAAPGTFLHGLFE
SIDFTEPPEALWLEDQLQQNGYSLSWLPVIQQWIARVLTTPLNKEGVTLSSINSRDRLIE
MEFYLPINNLLTATDLDALVRRYDPLSQRGPALDFRQVKGMLKGFIDLVFRWQGKYYLLD
YKSNWLGESHAAYTPEAMEQAMIDHRYDLQYQLYTLALHRYLQHRLAGYDYQQHFGGVFY
LFLRGVDGSPADNGIFATRPDPAFIDEMDRLFGNTEEML
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagtcaagacccgagtcgcttaacccgttaacgctgccgctgaacggtgaacgg
ttaattgaggcgtcagcggggaccggtaaaacctttacgatcggcctgctctatttacgt
ctgctattagggctgggcggtgagaacgcctggcgcaggccgctgtccgtcgaagagatt
ctggtggtgacctttaccgaagccgctacggctgaactgcgcggtcgtatccgtgacaat
atccatcagctacgtctggcctgcgtgcgtggtaaaagtcataaccccatgcaccaacag
ctgatggtgcagatcccagacctgccccaggccgcgtcacaactgctggcggccgagcga
caaatggatgaggcggcaatttttaccatccacggcttttgtcagcgcatgcttaacctg
aacgctttcgaatcgggcatgctgtttgagcaggagctgattgaaaacgaacagacgctg
ctccgacaggccacggccgatttctggcgtcgccagtgttatcccctgtcgctggatgtg
gccagagtcattgcggcggagtggagcgggccggacagtttactgaccacgctgcggccc
tggctgcagggggagtcaccgacgctcaggcgcccacctcgcccagaggaaacgctggcc
tcccgccatgcggccaatcttgagcgaattaacgcccttaagcagcagtggcaggctgcc
agcgccgatgtggaagggctcattagcgcgtctggtgttgataagcgcagttatagcagt
aagcacttacctaactgggtggctaaagtcacccagtgggcactcgatgacacgcttgat
taccagttgcccaaagagctggagcgctttgggcagcaggtgctgcacgagaagaccaaa
aagggcgaggcaccgcaacatgcattgtttgatgcggtagatcgctttctggccgaaccg
ctgacgttgcgagacgtcattatctggcaggccctgaccgaggtccgcgaggcggtccag
cgcgaaaagcgtcagcgcgcactactgggctttgatgacctgttgagccgtctggatgag
gcgcttcaacagccgggcggggcactgctggcggaaacgattcgcgggcgcttcccggtc
gcgctgattgatgaattccaggataccgatccgcagcagtatcgtatctttcgtacgctg
tatctccatcagccagagttagccctgctgcttattggcgatcccaaacaggcgatttat
gccttccgtggtgcggatatctttacctatctgcgcgcccgtagtgaagttagtgctcac
tacacattagatactaactggcgctcctcgcctgacatggtggacagcgttaaccggctg
ttttcacaggttgattcgccgtttctgttctcttccattccttttctcccggtcagtccg
gctgcgcctaatcaggccctgaagctgatttatcagcagcaaccgcagcccgcgctgcgc
ttctggcttcagccgggtgaaggtgtgggagtaagtgattaccaacaatttatggcgcag
cagtgtgccgcggatatcagccgctggctggtagccggacagcaggggcaggcgctgatt
ggtaaaggcgatgccctgcagccggttaaggcatcggacattaccgtgctggtgcgcagc
cgtaacgaggccagcctgatccgcgatgcgctaaacagcctgtcgattccctccgtttat
ctttccagccgcgacagcgtttacaccacgccggaagcgcgtgaactgttatggctcctg
caggcggttcagtcacctgaacaggagcgattgctgcgcagcgcgctggcgacgtccatc
tttgctattgatgccgccgaactggacgcgctggcgcagaacgaacgccactgggatgca
ctggtggagcagtttgtcagctggcagcaaatctggcatcagcgcggcgttttacccatg
ctgcgcgacgtgatgatcacgcggcaactggccgaaaatatgctggcatcagacaatggc
gaacggcgcttaaccgatctgatgcacctgggtgaactcctgcaggaagcggcggttcag
ctcgacagcacccatgcgctggtgcgttttctggcacagcaaattgcccgccccgatagc
caggcggccagtcagcaactgcgtcttgaaagcgatcgtcatctggtgcaaatcgtcacc
attcataaatcgaaaggattgcagtatcccctggtctggctgccctttgccgccggattc
cgcgaggccgccagtgcgctgtatcacgatcgtgaaagctttgctgcgatgctggacgtg
cagggggatgagtacagcctgacgctggcagaagaggagcgcctggcagaggatttacgc
ctgctctacgtggcactgacccgttcggttcaccactgcagcgtaggcattgcaccgctg
attaagggcgcgcgtaaaaaagcgggtgaaagcgacttgcacaaaagcgcgctcggttat
ctggtgcagcgcggcgaaatcgccgatgccgcgcagctcagtcagcatctgcaggcgctt
gagggcgcgggaattgaggttatcagcagcgcgctccagcccggggcgatctggcatgaa
ggcctgggcagcaacgatgcgctgagcagtcgggaaatgacgcgagcgctggccgacagc
tggcgcgtcaccagttattcgggtttgcaacagcacggtagctcaccgctgctggacgcc
ttgcctaaatttgatatcgacgccgcaggcgaaacggcagacgaagaggataccctgttg
acgccgcaccattttccgcgcggtgcggcacccgggacgtttctccacggattgtttgag
tcaatcgatttcaccgaaccgccagaggcgctgtggctggaagatcagctccagcaaaac
gggtattcactcagttggcttccggtcattcagcagtggattgcgcgcgtcctgacaacg
ccgcttaacaaggaaggcgtaacgctgtccagtattaacagccgcgaccggctgattgaa
atggaattttatctcccgatcaataacctgctgaccgcgaccgatctggatgcgctggta
cgccggtacgatccgctgtcgcagcgcggtccggcactggatttccgccaggtgaaaggc
atgttgaaagggttcattgatttggtgttccgctggcagggaaaatactatctgctggat
tataaatcgaactggctgggggaaagtcatgccgcatacacgcccgaggcgatggagcag
gcgatgatcgaccaccgctacgatctgcaataccagctgtataccctggcgctgcaccgt
tatctccagcatcgtctggcaggctatgactaccaacagcatttcggcggcgtcttttac
ctgtttctgcgtggcgtcgatggcagcccggccgacaacggcattttcgccacccgaccc
gacccggcgtttattgatgaaatggacaggctgtttggcaatacagaggaaatgttatga
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