Pantoea ananatis AJ13355: PAJ_3329
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Entry
PAJ_3329 CDS
T01969
Symbol
uvrD
Name
(GenBank) DNA helicase II UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
paj
Pantoea ananatis AJ13355
Pathway
paj03420
Nucleotide excision repair
paj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
paj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PAJ_3329 (uvrD)
03430 Mismatch repair
PAJ_3329 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paj03400
]
PAJ_3329 (uvrD)
Enzymes [BR:
paj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PAJ_3329 (uvrD)
DNA repair and recombination proteins [BR:
paj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PAJ_3329 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
PAJ_3329 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
AAA_11
AAA_22
PhoH
Motif
Other DBs
NCBI-ProteinID:
BAK13409
UniProt:
A0A0H3L2B1
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All DBs
Position
3979099..3981261
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AA seq
720 aa
AA seq
DB search
MDVSELLDGLNDKQRKAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV
TFTNKAAAEMRHRIEQLIGTSQGGMWIGTFHGLAHRLLRAHHLDAGLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPARQGMWYINGKKDEGLRPKHIESYGNPVEQTWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFSNILVDEFQDTNNIQYAWIRMLAGDS
GKVIIVGDDDQSIYGWRGAQVENIQRFLKDFPGADTIRLEQNYRSTNNILKSANALIANN
NGRLGKELWTDGSDGEPISVYCAFNELDESRFVVNRIKAWMENGNALADCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALAYLRLMANRNDDAAFERVVNTPTRGVGD
RTLDVVRQTAREKQITLWQATRELLQSRALAGRAASALQRFCELVDSLASETVDMPLHVQ
TDRVIKDSGLWIMYEQEKGEKGQARIENLEELVTATRQFSYQDEDEDLMPLQAFLSHAAL
EAGEGQADKWQDAVQLMTLHSAKGLEFSQVFIVGMEEGMFPSQMALDEGGRLEEERRLAY
VGVTRAMMKLTLTYAETRRLYGKEVYHRPSRFIGELPEACIEEVRLRASVTRPVSHQRMG
TPISKNDTGFALGQRVRHAKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYAKLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgaactgctcgacggtttgaatgacaaacagcgcaaggccgttgcggcg
ccgcgcagtaacctgctggtgctggcgggcgcgggcagcggaaaaacacgcgttctggtg
caccgcatcgcctggctgctgtcggtagaaaactgctcgccgtactccattatggccgtg
acctttaccaacaaggcagccgcagagatgcgccaccgtattgagcagctcattggtacc
agccaggggggaatgtggataggcacgttccacggtctggcacaccgcctgctgcgcgcg
catcatctcgacgcaggcctgccgcaggatttccagatcctcgacagtgaagaccagctg
cgcctgctcaagcgcctgattaaggcgatgaacctggatgagaagcagtggccagcgcgc
cagggcatgtggtacatcaacggcaagaaagatgaaggtttgcggcccaagcatattgaa
agctacggcaatccggtcgaacaaacctggctgcggatataccaggcctaccaggaagcc
tgcgatcgcgccgggctggtcgactttgctgaactgttgctgcgtgctcacgagctgtgg
ttaaacaaaccccatatcctgaatcattaccgtgagcgcttcagtaacattctggtggat
gagtttcaggataccaacaatattcagtacgcctggattcgcatgctggcgggcgacagc
ggcaaagtgattatcgtgggtgacgacgatcagtcaatttacggctggcgcggtgcgcag
gtcgaaaacattcagcgctttttaaaggattttcccggcgcggataccattcgcctggag
caaaactaccgctcgaccaacaacattttgaagtcagcgaatgccctgatcgccaataac
aacggccgactggggaaagaactgtggactgacggcagcgatggtgagcccatttcggtt
tactgcgcctttaacgagctggatgaatcccgctttgtggtcaaccgtatcaaggcctgg
atggaaaacggcaatgcgctggcggattgcgccatcctgtatcgcagcaatgcccaatcg
cgtgtgctggaagaagccctgctacaggccagcatgccgtaccgtatctatggcggtatg
cgctttttcgaacgtcaggaaatcaaggacgcgctggcttatctgcgactgatggccaac
cgcaacgatgacgccgcctttgagcgcgtggtgaatacgccaacgcgcggtgtgggcgac
cgtacgctggatgtggtgcgtcagacggctcgggaaaagcagataaccttatggcaggca
acgcgcgagctgcttcagtcgcgcgccctggccggtcgtgcggcctctgcgctgcaacgc
ttctgtgagttagtggattcgctggcaagcgaaaccgtggatatgccgctgcacgtgcag
accgacagagtcatcaaggattctggcctgtggatcatgtacgagcaggaaaagggtgaa
aagggccaggcccgtatcgaaaacctggaagaactggtgacggcaacgcgccagttcagc
taccaggatgaagacgaagatttgatgccgctgcaggcattcctttctcatgcggctctc
gaagccggggaaggccaggcggacaaatggcaggatgcggtgcagctgatgacgttgcac
tccgcgaaaggcctggagtttagccaggtgtttattgtcgggatggaagagggcatgttc
ccgagccagatggcgctggatgaaggcgggcgactggaagaagagcgtcgcctggcttac
gtcggcgtcacgcgtgccatgatgaagctgaccctgacctatgcggaaacccgccgtctt
tacggtaaagaagtctaccatcgaccttcacgttttattggcgaactgcctgaagcctgt
attgaagaagtccgtttacgcgccagtgtgacgcgaccggtcagtcatcagcgcatgggc
acgccgatcagcaaaaacgacacgggattcgccctggggcaacgcgttcgccacgccaaa
tttggtgaaggcactattgtgaatctcgaaggcagcggagaacacagccgcttgcaggtg
gcgtttcagggccaggggatcaagtggctggtggccgcctacgctaaactggaaaccgtc
tag
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