Pantoea ananatis AJ13355: PAJ_p0254
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Entry
PAJ_p0254 CDS
T01969
Symbol
ycdC
Name
(GenBank) putative HTH-type transcriptional regulator YcdC
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
paj
Pantoea ananatis AJ13355
Brite
KEGG Orthology (KO) [BR:
paj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paj03000
]
PAJ_p0254 (ycdC)
Transcription factors [BR:
paj03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
PAJ_p0254 (ycdC)
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Ortholog
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GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
Motif
Other DBs
NCBI-ProteinID:
BAK14121
UniProt:
A0A0H3L479
LinkDB
All DBs
Position
pEA320:283346..284035
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AA seq
229 aa
AA seq
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MKPLSENPGSDAGENLAAKTPSKSVTRRSRAVAAKRGAIMAAALEFFSLYGFHGTRLEQV
AERADVSKTNLFYYFPSKEDLYIAVLKGLLDIWLAPLKALQSDQHPLEAIREYIRLKLCV
SRDHPQASRLFCLEMVQGAPLLKQELGGSLKTLVEDKSDVIRGWIKDELIAPIDPMQLIF
MLWATTQHYADFGVQVEAITGKTLSDPVFFEQTVKSVQHIITEGIQIRA
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgaagccattgtccgaaaacccgggttctgacgccggagaaaacctcgccgcgaaaacg
ccatcgaaatctgtgacgcgacgttcgcgagcggttgctgccaaacgtggcgctatcatg
gccgctgcactggaattcttctcactgtatggctttcacggcacccgtcttgagcaggtt
gctgaacgcgcggatgtctcgaaaaccaatctgttctattactttccctcgaaagaagat
ttatacattgcggtgctcaaagggctgctggatatctggctggcaccgcttaaagcactg
cagtccgatcagcatcctctggaagcaatacgggaatatattcgcctgaagctttgcgtc
tcccgtgaccatcctcaggcctcaagattattttgtctggagatggttcagggcgcaccg
ctgctgaaacaggagctgggcggcagcctgaaaacgctggtggaggataaatcggacgtg
attcgcggctggattaaagatgagttgatcgcacccatcgatccgatgcagttgattttt
atgctgtgggccaccactcagcattacgcagattttggggtacaggttgaggcgattacc
ggtaaaacactcagcgatcctgtgttttttgaacaaacggtgaagagtgtccagcacatc
attaccgaagggattcagattcgggcgtaa
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