Parapusillimonas sp. JC17: ACSBPU_09555
Help
Entry
ACSBPU_09555 CDS
T11545
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
pajc Parapusillimonas sp. JC17
Pathway
pajc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pajc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACSBPU_09555 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pajc03400
]
ACSBPU_09555 (uvrB)
DNA repair and recombination proteins [BR:
pajc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACSBPU_09555 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACSBPU_09555 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
Kinesin
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
XZF97215
LinkDB
All DBs
Position
1971975..1973999
Genome browser
AA seq
674 aa
AA seq
DB search
MNSNARGFIEFPDSPFQLYQPYPPAGDQPAAIDALVEGIGDGLMYQTLLGVTGSGKTYTM
ANVIARTGRPAIVLAPNKTLAAQLYAEMREFFPRNAVEYFVSYYDYYQPEAYVAARDLFI
EKDSSINEHIEQMRLSATKSLLERRDTIIVGTVSCIYGIGNPGDYHAMVLTLRAGDRIAR
QELLGRLVAMQYERNDVEFTRGHFRARGEVVDVFPAEHAELALRITMFDDEIETLEMFDP
LTGKIKQKVPRFTVFPSSHYVTPRETVLRAVDTIKEELRDRAAFLVAEGKLVEAQRLEQR
TRFDLEMLQELGFCKGIENYSRHLSGAAPGEPPPTLIDYLPADALMFIDESHVTMGQLSA
MYRGDRSRKSTLVQFGFRLPSAMDNRPLKLEEFEHRMRQCVFVSATPAAYEKEHSDNVVE
QVVRPTGLVDPEVEVRPALTQVDDLLGEIKKRIAVQERVLVTTLTKRMAEDLTDYLSENG
LKVRYLHSDIDTVERVEIIRDLRLGVFDVLVGINLLREGLDIPEVSLVAILDADKEGFLR
SERSLIQTIGRAARNLNGRAILYADRITDSMQRAMGETERRRNKQLAFNQQHGITARGVS
KAVREMIDGVMATPEAPSMVDDVPAEILRDDKLLAKEIRRLEKRMMDHAKNLEFEQAAAA
RDALNRLKEKALLS
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaacgcgcgtggattcatcgagtttcccgacagccccttccagctttatcag
ccttacccgccggccggcgaccagccggcggccatcgatgcgcttgtcgaaggcatcggc
gacggcctcatgtaccagacgctgctgggggtgacgggctcgggcaagacctacaccatg
gccaatgtcattgcccgcacgggccgcccggccatcgtgctggcgccgaacaagacgctg
gccgcccagctgtacgcggagatgcgcgaattctttccgcgcaatgccgtcgaatacttc
gtttcctactatgactactaccagccggaagcctatgtggccgcgcgcgacctgttcata
gaaaaggattcctcgatcaacgagcacatcgagcagatgcgcctttccgccaccaagagc
ctgctcgagcgacgggatacgatcatcgtcggcacggtttcctgtatttacggcatcggc
aatcccggcgactaccacgccatggtgctcacgctgcgcgccggcgatcgcatcgcgcgc
caggaattgctcgggcgcctggtggccatgcagtacgaacgcaacgacgtcgagttcacg
cgtggccatttcagggcgcgcggagaggtcgtcgacgtgtttcccgccgagcatgccgaa
ctggcgctgcgaatcacgatgttcgacgacgagatcgaaacccttgaaatgttcgacccg
ctgaccggcaagatcaagcagaaagtaccgcgcttcacggtcttccccagctctcattat
gtgacgcctcgcgaaaccgtcttgcgggccgtcgataccatcaaggaagagttgcgcgat
cgagccgccttcctggttgcggagggcaagctggtcgaggcacagcggctggagcagcgc
acaagattcgatttggaaatgttgcaggaactgggcttttgcaagggcatcgagaactac
tcgcggcatctgtccggcgcggctcccggcgagccgccgccgaccctgatcgattacctg
ccggccgacgccctgatgttcatcgacgaaagccacgtcaccatgggtcagctcagcgcc
atgtaccgtggcgatcgctcgcgcaagtccacgctggtgcagtttggtttccggctgcct
tcggccatggacaaccgtccgctcaagctggaggagttcgagcaccgcatgcgtcaatgc
gtattcgtgtccgcgacgcccgcggcctacgagaaagagcactccgacaatgtggtggag
caggtcgtccggcccacggggctggtcgaccccgaagtggaggtccggcccgccttgacc
caggtcgacgacctgctcggcgagatcaagaaacggatcgcggtacaggagcgcgtgctg
gtgaccacgctgaccaagcgcatggccgaggacctaaccgattacctgagcgaaaacggc
ttgaaggtgcgttacctgcattccgatatcgatacggtcgagcgggtggagatcatccgc
gatctgcgcctgggcgtgttcgacgtgctggtgggcatcaacctgctgcgcgaagggctc
gatattcccgaagtgtcgctggtggcgattctggatgcggacaaggaaggcttcctgcgc
tccgaacgcagcctgatccagaccatcgggcgtgcggcgcgcaatctcaatggccgcgcc
attctgtatgccgatcgcattaccgattcgatgcagcgggccatgggcgaaacggagcgg
cgccgcaacaagcagctggcattcaatcagcagcacgggatcacggcgcgtggcgtcagc
aaggcggtgcgcgagatgatagacggtgtcatggcgacgcccgaggcaccctcgatggtg
gacgacgtgccggcagagattctgcgtgacgacaagctgctggccaaggaaatacggcgc
ctggagaagcgcatgatggatcacgccaagaacctggagttcgagcaggcggctgccgcg
cgcgatgcgctgaatcgtctgaaggaaaaagccttgctgagctga
DBGET
integrated database retrieval system
