Parapusillimonas sp. JC17: ACSBPU_12225
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Entry
ACSBPU_12225 CDS
T11545
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
pajc Parapusillimonas sp. JC17
Brite
KEGG Orthology (KO) [BR:
pajc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pajc03009
]
ACSBPU_12225 (der)
Ribosome biogenesis [BR:
pajc03009
]
Prokaryotic type
GTPases
ACSBPU_12225 (der)
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Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
KH_dom-like
FeoB_N
GTP_EFTU
Dynamin_N
RsgA_GTPase
AIG1
ABC_tran
AAA_22
AAA_24
Roc
ATP_bind_1
MeaB
NB-ARC
AAA_29
Septin
Ras
Hydantoinase_A
Motif
Other DBs
NCBI-ProteinID:
XZF97624
LinkDB
All DBs
Position
complement(2547494..2548909)
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AA seq
471 aa
AA seq
DB search
MSFKPVVALVGRANVGKSTLFNRITRSRAALVADFSGLTRDRHYGEGRVGNHPFIAVDTG
GFEPVAKDGILLEMARQTQQAIAESDVVIFLVDARAGVNAHDHEIARLLRKTGQRVFLAV
NKAEGMRYDAAISEFHELGLGQPHAISASHGDGVVELIETALSFLDETDHADQAEDATEE
PEAEAFAPPAADETPAEKAPIEHRIKLAIVGRPNVGKSTLINTLLGEERVIAFDMPGTTR
DAIEIDFERGGQRYTLIDTAGLRRRGKVFEAIEKFSVIKTLQAIEACNVVLLMLDAQTEI
SDQDAHIAGFVLETGRALVVAINKWDGLDGEQRERILREFERKLRFLSFAKMHTVSALNG
QGVNALIKSVNAAHAAAFAKLSTPKLTRVLQAAVEQQPPPRKGIFRPKMRYAHQGGQNPP
LIVIHGNALDAVPDAYKRYLESRFRAAFKLDGTPLRIEFKSSHNPYVQGTQ
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atttcctttaagccggtcgtggccctggtcgggcgcgccaatgtgggcaaatccacattg
ttcaaccggatcacgcgatcgcgtgcggcgctggtggccgatttttcgggtctgacccgt
gatcgccactatggcgaaggccgcgtcggcaaccatccgttcatcgcggtcgacaccggc
ggcttcgagccggttgccaaggacggcatactgctcgaaatggcgcgccagacgcagcag
gccatcgccgaatccgacgtcgtcattttcctggtggacgcccgcgccggcgtgaacgcc
cacgaccacgaaatcgcccggttattgcgcaagaccggccaacgggttttcctggccgtg
aacaaggccgagggcatgcgctacgatgccgcgatttcggaattccacgagcttggcctg
gggcagccccacgcgatttccgcctcgcacggcgatggcgttgtcgagctgatcgaaacg
gccctgtcttttctcgacgagactgaccacgccgatcaggcggaagacgctacggaagag
ccggaagccgaagccttcgcaccgcccgcggctgacgagacacccgccgagaaggcgccc
atcgagcatcgcatcaagctggccatcgtcggccggccgaacgtgggcaaatccaccctc
atcaacaccttgctgggcgaagagcgcgtcatcgcgttcgacatgccgggcacgacgcgg
gatgccatcgagatcgatttcgagcgcggcgggcagcggtacacgctgatcgacacggcg
ggattgcgccgccgcggcaaggtgttcgaagccatcgagaagttctcggtgatcaagacg
ctgcaggccatcgaggcgtgcaatgtcgtgctgctgatgctcgacgcccagacggagatc
tcggaccaggacgctcatatcgcgggcttcgtgctggaaacggggcgtgcgctggtggtg
gccatcaataagtgggacggcctggacggcgagcagcgcgaacgcatcctgcgcgaattc
gaacgcaagctgcgctttttgtcgtttgcgaaaatgcataccgtctcggcattgaatggt
cagggggtcaatgcactgatcaagtcggtgaacgccgcccatgcggcggcctttgccaag
ctttccacgcccaagctgacgcgtgtgctgcaagccgccgtcgagcagcagccgcccccg
cgcaaggggatattccggcccaagatgcgctatgcgcaccagggtgggcagaatccgccg
ctcattgtcatccatggcaatgcgctcgatgccgtgccggatgcctacaagcgctatctt
gaatcgcgtttccgcgcagccttcaagctcgacgggacgcctttgcgcatcgaattcaaa
tcatcccataatccttatgtacaggggacgcagtga
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