Paenibacillus sp. JNUCC32: JNUCC32_00050
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Entry
JNUCC32_00050 CDS
T11069
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
pajn Paenibacillus sp. JNUCC32
Pathway
pajn00860
Porphyrin metabolism
pajn01100
Metabolic pathways
pajn01240
Biosynthesis of cofactors
Module
pajn_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
pajn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
JNUCC32_00050 (cobD)
Enzymes [BR:
pajn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
JNUCC32_00050 (cobD)
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GFIT
Motif
Pfam:
CobD_Cbib
Motif
Other DBs
NCBI-ProteinID:
QOT10464
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Position
8261..9238
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AA seq
325 aa
AA seq
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MTAVWVIWAAVALDLLIGDPRWLPHPVIGMGKAIRRVEGWIRQRTVSAQGLKRAGILLPV
IVAGGSFVLAWLLLELCAAIHPWLAWGAEIVLIATTIAIKGLREAGLEVYGHLRSGNIAE
ARQALSMVVGRDTAHLDEPEIVRGTVETVAENIVDAVIAPLFFALIGGAPLALAYRAVNT
LDSMVGYKNEKYLHVGWASARLDDLANWIPARLTAGLLTIAAAMFSLQWKQAIKMVKRDA
RKHPSPNSGFPESAVAGALGIRLGGENSYQGVISFRAYMGDPDRPLEAEDIRVTNRLLVG
VSVLFTMLGTAVLGLAAAAGGSLWI
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgtatgggtcatatgggcggcggtggcgctggacctgctgatcggagatccg
agatggctgccgcatcccgtcatcggcatggggaaggcgatccgccgggtcgaaggatgg
attcgccagcggacggtttccgctcagggactgaagcgggcggggatattgctgccggtg
atcgtggccggcggctccttcgtgctggcatggctgctgctggagctgtgcgcagcgatt
catccttggcttgcctggggtgcggagatcgttctcattgcgactacgattgcgatcaag
gggctgcgcgaggcaggattggaggtctacggccatcttcgttccgggaatatcgccgag
gccaggcaagcgctaagcatggtggtcgggagggacaccgctcatctggatgagccggaa
attgtgcgggggacggtggagacggttgcggaaaatatcgtggacgcggtcatcgctccg
ctgttttttgccctgatcggaggggcgccgcttgcgttggcctaccgcgccgtgaatacg
ctggattccatggtcggttataaaaacgagaagtacctgcatgtaggctgggcctccgcc
cggctggacgatctcgccaattggataccggcacgcctgaccgccgggctgttgaccatc
gcggcggcgatgttctcgctgcagtggaaacaagcgatcaagatggttaaacgagatgcg
cgtaagcatcccagtccgaacagcggcttcccggaatcggccgttgccggtgccttgggg
attcgcctgggaggcgaaaattcgtaccaaggcgtgatctcgttccgggcttacatgggg
gaccccgaccgaccgctcgaagcggaggatatccgggtgacaaaccgtctgcttgtgggc
gtatcggttttgtttacgatgctgggcaccgcggtgctcggacttgctgccgcggcagga
ggaagcctatggatatga
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