Paenibacillus sp. JNUCC32: JNUCC32_00370
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Entry
JNUCC32_00370 CDS
T11069
Name
(GenBank) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
pajn Paenibacillus sp. JNUCC32
Pathway
pajn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pajn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
JNUCC32_00370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pajn03400
]
JNUCC32_00370
DNA repair and recombination proteins [BR:
pajn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
JNUCC32_00370
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
MutS_III
MCU
Spectrin_SESTD1
AAA_22
Gp-FAR-1
NAGidase
DUF4168
Tweety
Acylphosphatase
DUF6650
Motif
Other DBs
NCBI-ProteinID:
QOT10524
LinkDB
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Position
77109..79478
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AA seq
789 aa
AA seq
DB search
MNDKILHTLEYRKILNTLTQYTQTSMGSLRAERLMPETDLEAVKDLLAATDQAYTVDRLK
GNPSFRGITDINDALKRARIGGTLNPHELLATSNTIHGSRRIKRFIAAIHEDEKIDILFN
LSDLISEQKPLEDAIRLCIDETAEVLDSASAELSQIRRELRGGEVRIREKLESMIRSQSV
AKMLQDQLITIRGDRFVIPVKAEYRSHFGGIVHDQSGSGATLFIEPESIVAMNNKLRETR
MREEREIEVILQKLTAQVGEQAELLSIDVDLIGQLDFIFAKARLAHVMKASLPRMNDRGY
IKLRRGRHPLIPTDQVVPLDVELGNSYTSIIVTGPNTGGKTVTLKTIGLLNLMAMSGLFI
PAEEGSQMCVFDAIYADIGDEQSIEQSLSTFSSHMTNIIRILSQMTPKSLVLLDEVGAGT
DPAEGSALAISILEHIHRMGCRMIATTHYSELKAYAYERKGVINASMEFDINTLSPTYRL
LVGVPGRSNAFAIAERLGLPGSILEFARGEVKEEDQRVEHMIASLEENRHTAEVEREKAE
QVRKEMEELRQRHQQELQKLEEQKDKLVDKARAEARQIVDKARSEAEEIIADLRKIAQEE
GASVKEHKLIAARKRLDDAEPQQGKKTGGQRSAKQQRSIEPGDEVRVYSLNQKGHVVEMS
GSKEAVVQLGIMKMKVALDDLELLSNQAANAKQAPKQHATVLKRTRDANIRNELDLRGAN
LEEALIEVDRFIDEAFLGNLGQIYIIHGKGTGILRTGIQDYLRKHKHVKSHRLGNYGEGG
NGVTIAELK
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgacaagattttgcacactttagaataccggaaaattttaaatacattgacgcaa
tatacccaaacctccatgggaagtttgagggctgaaaggttaatgccagagaccgacctc
gaagccgtgaaggatctgctcgcggccaccgaccaggcttacaccgtagaccggcttaag
ggcaacccgtccttccgcggcattaccgacatcaacgatgctttgaagcgggctcgaatc
ggaggcacgctgaatccgcatgaattgcttgccacgtcgaacacgattcacgggtcgcga
cgaatcaaacggtttatcgctgcgattcatgaggatgagaagattgatattctctttaat
ttaagcgatcttatttcggagcagaagccgctggaggatgccattcggctctgcatcgat
gaaacggccgaggtgctggactccgcaagcgcggagctgtcgcaaattcggagggagctg
cgaggcggagaggtacgcatccgcgagaagctggaatccatgatccgttcgcaatcggtg
gcgaaaatgctgcaggaccagctgattacgattcgcggcgaccgattcgtcattcccgtc
aaagcggagtatcgctcccactttggcggtatcgtacacgaccagtccggctcgggcgcg
acactgttcatcgaaccggagtccatcgtggcgatgaacaacaagctgcgcgagacccgg
atgcgggaagaacgggagattgaagtgattctgcagaagctgaccgcccaggtcggcgaa
caggctgaactgctgtccatcgacgtcgatctgatcgggcagctcgattttatttttgcc
aaagcccgtttagctcatgtgatgaaggcttcgctcccgcggatgaacgacagaggatat
attaagctgcgcagaggcagacatccgctcataccgacggaccaggtcgtgccgctggac
gtggaattgggcaattcctatacctccatcatcgtcacgggcccgaataccggcggtaag
acggttacgctcaaaacgatcggtttattaaacctgatggcgatgtccggactgtttatt
ccggccgaagaaggcagccagatgtgcgtgttcgatgcgatctacgcggatattggcgat
gagcaaagcattgagcagagcctgagtaccttctccagccatatgaccaacatcattcgc
attttaagccagatgacgccgaagagcctggtcctgctcgatgaagtgggggcggggacc
gacccggcggaaggttcggctctggcgatttccattctggagcatatccaccgcatgggc
tgccgcatgatcgcgacgacgcactattccgaattgaaggcatacgcctatgaacgcaaa
ggcgtgatcaatgccagcatggagttcgatatcaataccctaagtccgacttatcggctg
ctggtgggcgttcctggacgaagtaacgcgtttgctattgcagaacgtctgggattgcca
ggatccattctggaattcgcccgcggggaagtgaaggaagaggatcagcgggtggagcat
atgattgcgtccctcgaggagaaccggcataccgctgaagtggagcgtgagaaggcggaa
caggttcggaaggaaatggaggaactgcgtcaacgtcaccagcaggagcttcagaagctc
gaggagcagaaagacaaactcgttgataaggctcgggcggaagcaagacagatcgtggac
aaggcgcggagcgaagccgaggagatcattgcggacctgcgcaagattgcccaggaggaa
ggggcttccgttaaggagcacaagctgatcgcggccagaaagcgcctggatgacgccgag
ccgcagcagggcaagaaaacgggcggccagcgttctgcgaagcagcagcgcagcatcgag
cccggggatgaggttcgggtatacagcctgaatcagaaggggcatgtcgtggagatgtcc
ggctcgaaggaagccgtcgttcagcttggcattatgaagatgaaggtcgcgctggacgat
ttggagctgctgtcgaatcaagccgccaatgccaagcaggcaccgaaacagcatgccacc
gtcctgaagcggacccgcgatgccaacatccggaatgagctggatttaaggggagcgaac
ctggaagaagccttgatcgaggtggaccggttcattgatgaggcgtttttggggaatctg
ggacagatctacatcattcacggcaagggaaccggcattttgcgaaccggcattcaggat
tatttgcgcaagcacaaacatgtcaaaagccatcgtttaggcaattacggcgaaggcggc
aatggcgttacgattgccgagttgaaataa
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