KEGG   Paenibacillus sp. JNUCC32: JNUCC32_02920
Entry
JNUCC32_02920     CDS       T11069                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pajn  Paenibacillus sp. JNUCC32
Pathway
pajn03030  DNA replication
pajn03430  Mismatch repair
pajn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pajn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    JNUCC32_02920
   03430 Mismatch repair
    JNUCC32_02920
   03440 Homologous recombination
    JNUCC32_02920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pajn03032]
    JNUCC32_02920
   03400 DNA repair and recombination proteins [BR:pajn03400]
    JNUCC32_02920
Enzymes [BR:pajn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     JNUCC32_02920
DNA replication proteins [BR:pajn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     JNUCC32_02920
DNA repair and recombination proteins [BR:pajn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     JNUCC32_02920
SSDB
Motif
Pfam: RNase_T DEDDh_C Rv2179c-like RNase_H_2 Myosin-VI_CBD
Other DBs
NCBI-ProteinID: QOT11004
LinkDB
Position
645521..646261
AA seq 246 aa
MTEPVQSNGGFWRSLRSGNINSAIASMRGAQTAQQLAFIRSQMKDNRRPEVLGTPLDELE
VVVFDLETTGFNHQHGDEILSFGAIRVIGEQVIENETFHMIVNSGAPVSPFIAELTGITQ
QMVDAAPPLMEGLHDFMAFIGGRVLVAHAAAHDRGFLNAALWKTSKVRLTHRLLDTMMLA
QRLYPEQKDYSLDELLRSSGIPVEGRHHALSDARMTARLWADYMKDIQARGQATTLGDLY
VYLSEG
NT seq 741 nt   +upstreamnt  +downstreamnt
atgactgaaccggtacaatcgaacggcggtttctggagatcgcttcgttcgggtaacatc
aattccgccatcgcctccatgcgcggggcgcagacggcccagcaattggcattcatccga
tcccagatgaaggataaccggaggccggaggttctgggcaccccgctggacgagctggag
gttgtcgtgttcgatctggagacgacggggttcaaccatcagcacggcgatgaaatactg
tctttcggtgcgatccgggtcatcggggagcaggtgatcgagaatgaaacctttcatatg
atcgtgaacagcggtgccccggtgtctccattcattgccgagcttacgggtatcacgcag
caaatggttgatgcagccccgcctttaatggaggggctgcatgatttcatggcctttata
ggggggagggtgcttgttgcccatgccgccgcgcatgaccggggtttcttgaacgccgcc
ttgtggaagacctccaaggttcgattaacgcatcggctgctcgatacgatgatgctcgcg
cagaggttatatcccgaacagaaggattacagtctggatgagctgctgcgaagcagcggc
attccggtggagggaaggcaccatgctctgtccgatgcgcgcatgaccgcccggctgtgg
gccgattacatgaaagacattcaggcgcgcggccaggctaccacgctaggagatttatac
gtctatctaagcgaggggtag

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