Paenibacillus sp. JNUCC32: JNUCC32_05205
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Entry
JNUCC32_05205 CDS
T11069
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pajn Paenibacillus sp. JNUCC32
Brite
KEGG Orthology (KO) [BR:
pajn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pajn03016
]
JNUCC32_05205 (truB)
Enzymes [BR:
pajn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JNUCC32_05205 (truB)
Transfer RNA biogenesis [BR:
pajn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JNUCC32_05205 (truB)
Prokaryotic type
JNUCC32_05205 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QOT11430
LinkDB
All DBs
Position
1131644..1132555
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AA seq
303 aa
AA seq
DB search
MTQLEGILAVHKPAGWTSHDVVAKVRGMVRLKRIGHTGTLDPEVTGVLPLCLGRATRVVE
YLQELPKEYHAVLRLGYSTDTEDITGNVVETADEVRVTRDEALEALQSFTGQISQVPPMY
SAVKINGKRLYELAREGKTVERKSRTVTIHEIEMTDFDAEGEYTEISFRVLCSKGTYIRT
LCVDIGRKLGLPSVMVKLVRTISAGITEAQCLTLEQIEQYMKDETLQTRLIPVDQAIHHL
AKHTVSEEKAEAALKGQRLSSRAVEPAVDSSEPIRLYDIKENFLGIYKRQEETGAIVPVK
VFS
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaattagaaggcatcttggccgttcacaaaccggccggatggacctcccacgat
gtggtagccaaagttcggggaatggttcgtttgaagcggatcggacataccgggacgctg
gaccctgaagtgacgggcgtgcttccgttatgcttggggagagctacgcgggtcgtcgaa
tatctgcaggagctgcctaaagagtatcatgcggtcctccgccttggatactcgaccgat
accgaggatattaccgggaatgtggtggagactgcggatgaagtccgcgtgaccagagac
gaggcgcttgaagcgctgcaatcttttacaggccagatctctcaggttcctcctatgtat
tccgccgtcaaaatcaacggcaaacgattgtacgagcttgccagagaaggcaagacggtg
gagcgcaaaagccgtaccgtaacgattcatgaaatcgagatgacggactttgatgcggaa
ggggagtatacggaaatttctttccgtgtactgtgctccaaaggtacatacatccgcacg
ctttgtgtggatatcgggaggaagctcggcctgccgtccgtcatggttaagctggtacgt
acgatatcggcgggaatcaccgaggcgcagtgcttgaccctagagcaaattgagcagtac
atgaaggatgaaacgctgcaaacccggcttattccggtggatcaagcgattcatcatcta
gcaaagcatacggtttccgaagagaaggcggaggccgcgctgaaggggcaacgcttgtcc
tccagggcggtagaaccggccgtcgacagttcggagcctatccgtttgtacgatataaag
gaaaactttctgggcatctataagcgtcaggaagagacgggcgctatcgttcccgtgaaa
gtattttcctaa
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