Paenibacillus sp. JNUCC32: JNUCC32_08020
Help
Entry
JNUCC32_08020 CDS
T11069
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
pajn Paenibacillus sp. JNUCC32
Pathway
pajn00520
Amino sugar and nucleotide sugar metabolism
pajn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pajn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
JNUCC32_08020
Enzymes [BR:
pajn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
JNUCC32_08020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_39
HTH_18
HTH_AraC
Cupin_2
AraC_binding
Cupin_1
DUF7588
ROS_MUCR
Motif
Other DBs
NCBI-ProteinID:
QOT11957
LinkDB
All DBs
Position
1738385..1740880
Genome browser
AA seq
831 aa
AA seq
DB search
MRYLYEFIEHQEDMPFKLFVNSVKHVPFHWHKEVEIVYVLQGSVIMHLDQKEYVLHQDDV
VVVNSMSIHKFEQNDHDNILLTLQFGPEWLQNNVFISCNSANEPEPVGFRLDTIKQELAK
MVWEMNKKSPGYRSFTLGRLQTLCGHLLRYFSEGINPEAEEGGKSYDYKRLNRVLTYIDQ
NYKEKITLQTMAEQEHLSLHYFSHFFTDKIGIPFQKYLTLIRLEKAQSELSGSEKSITEI
AMDCGFANVKLFNKYFKEKYGCTPSSYREAAASLQDKPNRKPLTYEESSSGDYYELDTIN
AMGSLYRYLEVKPDQERERAIPLTAVVTDHEQIQIQPGMSSAAYKKHWNVITTAGRAVEG
LRDDWRRQLTELKARIPFEYIRFHGIFNDEMMVYNEQDDGTPVYNWAYVDKLYDFLIGLG
IRPFVELGFMPTLLSRSSETVFWWRGNISPPADQAKWEALVREFVQHCLNRYGAQEVKQW
YFEVWNEPDLSGVCWAGSKEEYFSFYESTVRVIRSVLPELKTGGPALGYGSLWNDTWTEE
FMEYCKRHQVPVDFFSFHIYSEYPQLKAEQNILTRMMPPTFYKESIHRLQEKMEVASFRD
MELHITEWNFSLYDRHLLHDTMFMAPFVMYHAMNTLGDVKAMAFWCFTDVFEESLVPSSP
FYGGFGLMNRDGLKKPSYYAFELLQKLGEEITVKGEGYVGTQNQDGSMQLLLYHYVHLDH
MFSSGDWSEMSNLNRYGVFEEKGSKEFQVNIPHLSGTYKCTTYQMDRDHGSVFDEWVRMG
APEILTEEELAYLRGRSGPVIRIETIEDQGWYKEIVLPPHGVLLLTLEKQF
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgcgttacctttatgaatttatcgagcatcaagaggatatgccctttaaactgtttgtc
aacagcgtgaaacatgttccatttcactggcataaagaggtggagattgtctatgttctc
caaggttctgttatcatgcatcttgatcagaaggagtatgttctacatcaggacgacgtc
gtagtggtgaacagcatgtcgatccataagtttgagcagaatgaccatgacaatatatta
ttaacgcttcagtttgggccggaatggcttcaaaataacgtttttatttcttgtaattca
gcgaatgagcctgagccggtcggtttccgattggacacgatcaagcaagagcttgcgaag
atggtatgggaaatgaacaagaagtccccaggctatcgaagctttaccttgggaaggctg
caaacgttatgtggacatttattgcgatatttttcggaaggaatcaacccggaagctgaa
gaaggcggcaagagctatgactataaaaggttgaatcgggttctaacctatatcgatcaa
aattacaaagagaagattacactgcagacgatggcggagcaagagcacttaagtttgcat
tatttttctcacttcttcaccgataaaatcggtattccttttcaaaagtatttaacgctg
atccgtttggagaaggcccagtcggagctttcgggaagtgaaaagagcattaccgaaatt
gcgatggattgcggttttgcgaacgtaaagctattcaataagtacttcaaggagaagtac
ggttgtacaccgagctcgtaccgtgaagccgctgcctcgcttcaggataagcctaatcga
aaaccgcttacctatgaagaatcctcgagcggagactattatgaattagatacgatcaat
gcgatggggtcgttatatcggtacctggaagtgaagccggatcaagaacgggagagagca
atccctttaacagcggttgttacggatcatgagcaaatacagattcagccgggaatgtcg
tcagcagcgtacaaaaagcactggaacgttattacaacagcgggcagggcagttgaaggg
ctgcgcgatgactggcgtcggcagctgaccgagcttaaagcccgaattccttttgaatac
atacgcttccatggcatctttaatgatgagatgatggtatataacgaacaggatgacggg
acccctgtctataactgggcctatgttgacaagctgtatgactttcttattgggctgggc
atccggccgttcgtggagcttggtttcatgccgaccctgctcagccgctccagcgaaacg
gtattctggtggagagggaatatttcccctccggccgatcaggcaaaatgggaggcactg
gttcgtgagttcgtccagcactgcttaaaccgctatggggctcaggaagtaaaacaatgg
tattttgaagtctggaacgaaccggatttatcaggcgtatgctgggcaggcagcaaggag
gaatacttctcgttttatgagtctaccgttcgagtgatcaggtcggttctgcctgaacta
aaaacagggggcccggctttaggttatgggtcactctggaacgacacatggaccgaggag
tttatggaatattgcaaaaggcaccaagttccggtcgatttcttttcctttcatatctat
tcggaatatcctcagcttaaagcagagcaaaacatattgacgagaatgatgccgccaacc
ttttataaagagagcatccatcgactgcaggaaaaaatggaggtggcctctttccgggat
atggagctgcatattaccgaatggaacttttcgctctatgaccggcacctgctgcacgat
accatgtttatggccccatttgtgatgtatcatgcgatgaatacactgggagacgtaaag
gccatggcattttggtgctttacggatgtgtttgaggaaagtcttgttccatcctctccg
ttttacggaggttttggtttaatgaatcgggatggacttaagaagccgagttattacgcc
tttgagcttcttcagaaattgggtgaagagataaccgttaagggtgaaggctatgtgggc
actcagaatcaagatgggagcatgcagcttctgctgtatcattacgtccatttggatcat
atgttttcaagcggagactggtcggaaatgtccaatcttaaccgttacggcgtgttcgag
gagaagggcagcaaggagtttcaagtcaacattcctcatctttcaggaacctataagtgc
acgacttatcagatggacagagatcatggatccgtttttgacgagtgggtccgtatggga
gcacccgaaatcttgacggaggaggaactcgcgtatcttcgcggaagaagcggccctgtc
atccgaatagagacaatagaggatcagggttggtataaagagatcgttcttccaccgcat
ggtgtccttttgctcaccttagagaaacagttttaa
DBGET
integrated database retrieval system
