Paenibacillus sp. JNUCC32: JNUCC32_13235
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Entry
JNUCC32_13235 CDS
T11069
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
pajn Paenibacillus sp. JNUCC32
Pathway
pajn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pajn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JNUCC32_13235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pajn03400
]
JNUCC32_13235
Enzymes [BR:
pajn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
JNUCC32_13235
DNA repair and recombination proteins [BR:
pajn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
JNUCC32_13235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QOT12922
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All DBs
Position
complement(2995534..2996382)
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AA seq
282 aa
AA seq
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MKSKVRIGSHVSTRGGFLAAAQHAAGIGSLAYQYFPKNPRSLHLKTPDVRNAAACAKFCR
EQGLVSIAHTPYPTNMAVGLTRGEEFYRLTVDSLKNDLMIAEACGSLGIVVHFGHLKSQN
VLEGYQNIIRCMNDVLASWAGRAKLLIENQAGDHGAMGMTLEECVKVRQLADYPEKIGFC
LDTCHLFAAGGWDLSNTDELLARGKELAYWESAVAVHLNDSKYGAGSRKDRHARIGQGMI
GTEALKRLVLAPELAGKAFVLESEKGADGTHREDIAKVLSWS
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctaaagtccggattggaagccatgtcagcacacggggcggatttctcgcggca
gcccagcatgcagccgggatcggttcactggcgtatcagtattttccgaaaaatcctcgc
agtcttcacttgaagacgccggatgtccgcaatgctgcggcttgcgcgaagttttgtcgg
gagcaaggtctcgtctcgatcgcgcacacgccttatccaacgaatatggcggttggtttg
acccgaggagaagaattttatcggttgaccgtggattcccttaagaatgatcttatgatt
gccgaggcttgcgggtcgctgggcatcgttgtacattttgggcatctcaagagccagaac
gtgcttgaagggtaccagaacattattcgctgcatgaatgatgtgctggcttcctgggcg
ggcagggccaagctgctgatcgagaatcaggcgggagaccatggagctatgggaatgacg
cttgaagagtgcgttaaggttagacagcttgccgattatccggaaaaaataggcttttgt
ctggatacctgccacttgtttgccgccggaggctgggacttatcgaatacggatgagctc
cttgccagaggcaaggagctagcctattgggaatcggcggtagccgttcatttaaacgat
tcgaaatatggagccggctcaagaaaagatcgccatgcccgcatcgggcaaggcatgata
ggaacagaagcattgaagcgcctggttctggcaccggaacttgcgggtaaggcatttgtc
ttggaaagtgaaaaaggagctgacggcacgcatcgggaagacatcgccaaggtgctgtcc
tggtcctga
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