Paenibacillus sp. JNUCC32: JNUCC32_14400
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Entry
JNUCC32_14400 CDS
T11069
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pajn Paenibacillus sp. JNUCC32
Brite
KEGG Orthology (KO) [BR:
pajn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pajn03032
]
JNUCC32_14400
03036 Chromosome and associated proteins [BR:
pajn03036
]
JNUCC32_14400
03400 DNA repair and recombination proteins [BR:
pajn03400
]
JNUCC32_14400
DNA replication proteins [BR:
pajn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JNUCC32_14400
Chromosome and associated proteins [BR:
pajn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
JNUCC32_14400
DNA repair and recombination proteins [BR:
pajn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
JNUCC32_14400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_1
Rpf1_C
HU-DNA_bdg
RsbRD_N
PaaA_PaaC
Motif
Other DBs
NCBI-ProteinID:
QOT13140
LinkDB
All DBs
Position
complement(3218114..3218386)
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AA seq
90 aa
AA seq
DB search
MNKSDLITQVAESTELSKKDATKAVDAVFDAISEALQSGDKVQLVGFGNFEVRERSARKG
RNPQTGEEIEIPASKIPAFKPGKALKDGIK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatcggatctgattacacaagtagctgaatctactgagctttccaagaaagat
gcaactaaagcggttgatgccgttttcgatgcaatctccgaagcattgcaaagtggagac
aaggtacaactggtcggttttggcaacttcgaggttcgcgagcgttccgcacggaaaggc
cgcaacccgcaaacaggtgaagaaatcgaaatccctgcgagcaaaattcctgcatttaaa
cctggtaaagcgctcaaagacggaatcaaataa
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