Paenibacillus sp. JNUCC32: JNUCC32_15610
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Entry
JNUCC32_15610 CDS
T11069
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pajn Paenibacillus sp. JNUCC32
Pathway
pajn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pajn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JNUCC32_15610 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pajn03400
]
JNUCC32_15610 (priA)
Enzymes [BR:
pajn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JNUCC32_15610 (priA)
DNA repair and recombination proteins [BR:
pajn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JNUCC32_15610 (priA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Helicase_C
PriA_C
Zn_ribbon_PriA
Helicase_C_2
WHD_PriA_bact
Cas3-like_C_2
Zn_ribbon_6
PIF1
T2SSE
RUBY_RBDX
Flavi_DEAD
nSTAND_NTPase5
ADDB_N
MarR_2
SLFN-g3_helicase
DAP3
AAA_30
Zn_ribbon_ISL3
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QOT13373
LinkDB
All DBs
Position
complement(3467846..3470374)
Genome browser
AA seq
842 aa
AA seq
DB search
MEMARVIVDVPSKDTDRPFDYLIPEELRPWVEVGSRVGVPFGHRTLQGFVVSLHPRPEMD
TAKMKPIQEVLDVMPPLSPELIELGEWMKERYACRYISALQSMLPTALKGKAERYISLGE
PDAGLSDESGGLFALLPESELEQEIIRFVSQRGEVSLQQLTRAFPDAAATVKALIGRGRL
SEFQQIKDKLQKKTMKAVELAVSSEEAHVALASFPAKAQRQKEVLQYIVEMEDFLPISQK
DLLQTLGVTAGTVKALADKGLITLEDVEVFRDPYRGRHFTPSAPLALTPEQQAVYRSIVR
KLDERKHGAFLLHGVTGSGKTEIYLQTIQRCMDQERQAIVLVPEISLTPQMVERFKARFG
DRVAVMHSRLSDGERYDEWRKIREGRASVVVGARSAVFAPFDRLGLIIMDEEHESSYKQE
ETPKYHARDVAIHRASLTGAAVILGSATPSLESYHAARSQAQDDFAPHLLEMPSRALGNQ
LPAVQVVDMREELREGNRSMFSRSLHAAISARLERGEQTVLLLNRRGYSTFVMCRSCGYV
AGCPECDISLTYHQKSNNLRCHYCGYAAQAPEVCPDCGSEHIRYFGTGTQRVEEELAKLF
PGIRVIRMDVDTTTEKGSHEKLLKQFRDKKGDVLLGTQMVAKGLDFPDVTLVGVITADSA
LNLPDFRAAEKTFQLLTQVAGRAGRHQLPGEVVIQSYTPEHYSIIHASSHDYLSFVKDEL
KHRKALHYPPYCRLILVTLSHEQLPLLVRLAENFAAAIKSESDRRGWFGSLDRFDASALD
ILGPVASPIPRLKNRYRFQCMIKWRGTMDAVSLVRSVAEKLQDSARDGKLQISIDVDPQM
LM
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggcccgtgtgattgtggacgtgccgtccaaggatacggaccgtccgtttgat
tatctgattccggaggagctccggccatgggtcgaggtaggcagccgggtcggcgtgccg
ttcggtcaccgtacgcttcagggattcgtggtttcgctgcatccccggcccgagatggat
acggccaaaatgaagcccattcaggaagtcctcgatgtgatgcctccgctctcgcctgag
ctgattgagcttggagaatggatgaaagagcggtatgcatgccgttatatatccgctctt
caatcgatgctgccaacggcgctgaagggaaaagccgagcggtatatttcccttggcgag
ccggatgcgggcttgtcggatgaaagcggcggattattcgcgctcctcccggaaagcgaa
ttggagcaggagatcatccggtttgtcagtcagcgaggcgaggtgtcgctccagcagtta
acgcgagcgtttccggatgcggcagccaccgtaaaagcgctgatcggccgggggcggtta
agcgaattccagcaaatcaaggacaaactgcagaaaaaaacgatgaaagcggtagagctt
gccgtttcgagcgaggaagcgcatgtggcgctggcttcgtttccggctaaggctcagcgg
cagaaggaagtgctccaatatatcgtagagatggaggacttcctgccgatatcgcagaag
gatctgctgcagacgctcggcgtcaccgcaggcaccgtgaaggcgctggccgacaaggga
ctgattacccttgaggatgtcgaagtgttccgcgacccgtaccggggacggcactttacg
cccagcgccccgctggcgctcacgccggagcagcaggcggtgtaccggagcatcgtgcgc
aagctggatgaacgcaagcatggcgcgtttctcctgcacggggtaacgggcagcggcaag
accgagatctacctgcagaccattcagcgctgcatggatcaggagcgtcaggcgattgtc
ctggtgcccgaaatatcgctcacaccccaaatggtggagcggttcaaagcccgcttcggc
gaccgcgtggccgtcatgcacagccggctttcggatggtgagcgctacgatgaatggcgc
aaaattagggaaggccgggcttcggttgtcgtgggagcacgatcggcggtgtttgcgccg
tttgaccgacttggccttattattatggatgaagagcatgaaagttcatataagcaggaa
gaaacgccgaagtaccatgccagggacgtggcgattcaccgtgcctcgctgacaggcgca
gccgtcattctgggctcggcaacgccttcgcttgaaagctaccatgcggccagatcgcag
gctcaggatgattttgctccgcatctgctggagatgccgagccgggcgctgggcaaccag
ctgccggctgttcaggtcgtggatatgcgggaggagctccgggaagggaatcgctccatg
ttcagccgctccctgcatgccgcgatttcggcgcggctggaacgcggagaacagacggtg
ctgctgctgaatcggcgggggtattccactttcgtgatgtgccggagctgcggatatgtg
gcaggctgtcctgaatgcgatatttcgctgacctaccatcagaaatcgaacaatctgcgc
tgccattattgcggttacgccgcacaggcgccggaggtttgcccggattgcgggagcgag
catatacgctatttcggaacgggcacgcagcgtgtcgaggaagaattggccaagctgttc
ccagggattcgcgtcattcggatggacgtggacacgacgaccgagaagggctcccacgag
aagctgctgaagcagtttcgggataaaaagggcgacgtgctgcttggaacccaaatggtc
gccaaaggcctggatttcccggatgtcaccctggtcggcgtcattacggccgattcggcg
ctgaacctgcccgacttccgggcggccgagaagacgtttcagctgctgacccaggtggcc
ggaagagcgggacgccatcagctgccgggtgaagtggtcatccaatcctacacgcccgag
cattattcgattattcatgcaagcagccatgattatttatccttcgtcaaggatgagctg
aagcaccgcaaagcgctccattatccaccgtactgcaggctgattctggtgacgctgtcg
catgaacagctgccgctgctcgtacgactggcagagaattttgccgccgccatcaaaagc
gaatccgaccgccggggatggttcggaagcctggaccggttcgacgcaagcgcgctcgat
atcctgggtccggtggcttcccccattccgcggttaaaaaatagatacagatttcaatgt
atgataaaatggcggggaacgatggatgctgtctcgctggtgcgttcggttgccgagaag
cttcaggattcggcgcgggacggcaagctccaaatcagtattgacgttgatccgcaaatg
ttaatgtaa
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