Paenibacillus sp. JNUCC32: JNUCC32_16620
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Entry
JNUCC32_16620 CDS
T11069
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pajn Paenibacillus sp. JNUCC32
Brite
KEGG Orthology (KO) [BR:
pajn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pajn03400
]
JNUCC32_16620 (addB)
Enzymes [BR:
pajn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JNUCC32_16620 (addB)
DNA repair and recombination proteins [BR:
pajn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
JNUCC32_16620 (addB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QOT07815
LinkDB
All DBs
Position
complement(3684175..3687705)
Genome browser
AA seq
1176 aa
AA seq
DB search
MGVQFVIGRSGSGKSTSIRQEMIERLEHNPKGDPMILIVPEQGSYEAEHALVNAGGIRGM
MRAQVLSFRRLAYRVMQETGGAAKVAISEEGKRMLLYKILRRRKEELHMFGASGEQHGFV
GKLSELYTEMKRYCIDASCVEEQLGQMVSGSGNSPMLRRKLEDIVTVFRDFELEISRFYM
DEEDTLASLADGVAESEYIKRADIWIDGFHGFTPQEYRVLREIIANAKRVTIALTLDKPY
RNGTVPHELDLFHPTAVTYIKLKGIIDEIGLEAEHRILHPDVLPRFQESPMLAHLERGYD
RKRRWAEPDDGPDTASSPNRGRKGLLLHAASHRRAEIEGALREMLRLAQEEGARYREMAV
FVRNMGDYEHLMGPLFREYGVPYFLDQKRSELHHPLVEFIRSALDVIGRRWRYEDVFRCV
KTDLLLPLDGSLTREDMDRLENHALASGIQGTRWTDGRPWKGVPSLSLEEGESEIRNQDG
MAAIEYARKVITEPLHAFEKRMKKAASAMDQSTAVYRLLEECAVPEKLELLSRAALDAGR
PEEAREHRQVWGAVLGLLDQIVEMMGAEKLSTELFTGVLGTGLTEMKMALVPPSLDQVLI
GSMDRTRTGGVKYAFLLGINDGVLPAQFQDDGILTEPERVHLEDRGLELAPSISRRLLDE
RFLIYNALTSASKQLWVSYPAADDEGKPLLPSEVVRHLKLMFQLEEEPLFPRPHAGQSAL
EQEGYAVRPDKTLAYLAGRLRDWRNGEEIPDLWWHVYNWYAEQPGLRPRLTTMLSSLSYR
NEARPLKLETSRQLYGTKLRTSVSRMERFVACPFSHFASHGLKLRERQLYRLQAPDIGQL
FHAALSSMAVKFQSQHRSWGDLTAEECLREAEATVDRLAPMLQGEILLSSKRYGYISRKL
KNIVGRASVILGEQARRGKFEPIGFELDFGPGKPLPPLAFELPNGTKMEIVGRIDRVDMA
RGEHGIMLRVIDYKSSQKDLRLHEVYYGLSLQMLTYLDVLLTFAEEWLGEQALPAGTLYF
HVHDPVLQSANGMTPEQAAEELLKRYKMKGLLLADREAVSLMDSFLEKGHSAILPVAVKT
DGSFYSSAAVATPDQWETLLSAVRENMLNIGSRITGGDVAIKPYRIQQETACTFCSFRPV
CQFDDAIEGSEYQLLGKPGKDQVWDMLGHPKGGESR
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcaatttgttatcggcaggtcgggcagcggcaagagcacgtcgatccgccaa
gagatgatcgaacggttggagcataatcccaagggggatccgatgatcctgatcgttccg
gagcaagggtcctatgaagcggagcacgcgctcgtcaatgcgggaggcattcgcggcatg
atgcgcgcgcaggtgctaagcttccgccgtctggcttaccgcgtcatgcaggaaaccggc
ggagccgctaaagtggcgatcagcgaggaaggcaagcggatgctgctgtataaaattctg
cggaggcgcaaggaagagctccacatgttcggcgcctcgggagagcagcatggctttgtc
ggcaagctgagcgagctgtacacggaaatgaagcgctattgcattgacgcctcatgcgtg
gaggagcagctgggacagatggtatcgggctccgggaattcaccgatgctgcggcggaag
ctggaggacatcgtaacggtctttcgcgatttcgagcttgaaatttcacggttttacatg
gatgaggaagacacgctggcctcattggccgatggtgtggccgaatcggaatatatcaag
cgtgccgacatctggatcgacggcttccacggctttacgccgcaggagtaccgggtgctg
cgggagatcatcgcaaacgccaagcgagtgacgatcgcgctgacgctggacaagccttac
aggaacgggacggttccgcatgagctggatctctttcatcctactgcggtgacgtacata
aagctcaaagggattatcgatgagatcgggctggaggcggagcaccgcattcttcatccc
gatgttctgccgcggtttcaggaatctcccatgcttgcccatcttgagcgcggttatgat
cggaagagacgctgggcggaaccggatgatggcccggacacagcgagcagtccaaaccgc
gggaggaaaggtctgcttttacacgctgccagccatcgccgggccgaaatcgaaggagct
ctgcgcgaaatgctgcggctggcacaggaggaaggggcaagataccgcgaaatggctgtt
tttgtccggaatatgggggactatgagcatctgatgggtcctttgttcagggaatacggc
gttccttattttctcgatcagaagcggagcgagcttcaccatccgctggtcgagttcatt
cgctctgcgcttgatgtcatcggtcgccggtggcgttatgaggacgtattccgctgcgtg
aagacggatctgctgctgccgctggacggttcgcttacccgtgaggacatggaccgtctg
gagaaccatgcgctggcctccggaatccagggcacgcgctggacggacggccgtccctgg
aagggagttccaagcctttctttagaagagggggaaagcgagatccgcaatcaggacggc
atggcggcgatcgagtacgccaggaaggtgataacggaaccgctgcatgcgttcgagaag
cggatgaaaaaggctgcgagcgcgatggatcagagcaccgcggtctatcggctgctggag
gagtgcgctgtgcccgagaagctggagctgttaagccgggccgcactggatgccgggcgt
cctgaggaagcccgggaacaccgccaggtatggggtgccgtgctcggcttgctcgaccaa
atcgtcgagatgatgggcgcggagaagctaagcaccgaattgtttaccggcgtgctgggt
acgggacttacggaaatgaaaatggctcttgtgcctccgtctctggaccaggtgctcatc
ggcagcatggaccggacgcggacgggcggggtgaaatatgctttccttctcggcattaac
gacggcgtgctcccggcccagttccaggatgacggcatcctgacggagccggaacgggtt
catcttgaagaccgcgggctggagcttgccccgagcatatcccgaagactgctggatgaa
cggtttctgatctataatgcgctgacttcggccagcaaacagctgtgggtcagctaccct
gcagcggatgatgaaggcaagccgttactgccatccgaggtggtgcggcatctgaagctg
atgttccagctggaagaggagcctttgtttccaaggccgcatgccgggcaatcggccctt
gagcaggagggttatgcggtccgtccagacaagacgcttgcttatttagcgggccggctt
cgcgactggaggaatggggaggagatcccggatttgtggtggcatgtttacaactggtat
gcggagcagccgggtttgcggccccgccttacgaccatgctctcctccttgtcttaccgg
aatgaagcccggcctctcaagctggaaaccagcagacagttgtacggaacgaagctgcgg
acaagcgtatcccggatggagcgctttgttgcctgcccgttctcccattttgcctcccat
gggttgaagctgagagagcggcagctgtacaggcttcaggctcccgacatcggacagctg
ttccatgctgccttgagcagcatggccgtcaaattccaatcgcagcatcgaagctgggga
gacctgaccgccgaggaatgcctgcgcgaagcggaagcgaccgtggatcggctcgcaccc
atgctgcagggtgaaatcctgctcagctccaagcggtacggctatatttcgcgaaagctt
aaaaacatcgtgggcagagcatcggtcatattgggagagcaggcgaggcgcggcaaattc
gagccgatcggctttgaacttgatttcggtcccggaaagccgctgccacccctggcgttt
gaattgccgaacgggaccaagatggagattgtcgggcgcatagaccgggtcgacatggct
cgaggcgagcatggcatcatgcttcgagtcatcgattataaatcgagccagaaggatctg
cggctgcatgaggtctattacggcctatccctgcagatgctgacctatctggacgtgctg
ctgacgtttgcggaggaatggctgggcgagcaggccctgcctgcgggaaccttgtacttc
cacgtgcatgatccggtattgcagtccgccaacggcatgacgccggagcaggcggcggag
gagctgctcaagcgctacaaaatgaaaggcctgctcctggcagaccgcgaagcggtgtcc
ctcatggattcgttccttgaaaaagggcactctgccatcctgcccgtcgccgtcaaaacg
gacggcagcttctacagcagcgcggccgtggcaacgcctgaccagtgggagaccttgttg
tccgccgtgcgggagaacatgctgaacatcggctcccgcatcacaggcggcgatgtcgcg
attaaaccgtaccgtatacagcaggagaccgcctgcacgttctgttctttccggcccgta
tgtcagttcgacgacgcgattgagggcagcgaataccagctgctgggcaaaccgggcaaa
gatcaggtgtgggatatgcttggacatccgaagggaggagagagccggtga
DBGET
integrated database retrieval system
