Paenibacillus sp. JNUCC32: JNUCC32_16730
Help
Entry
JNUCC32_16730 CDS
T11069
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pajn Paenibacillus sp. JNUCC32
Pathway
pajn03030
DNA replication
pajn03430
Mismatch repair
pajn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pajn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JNUCC32_16730 (holA)
03430 Mismatch repair
JNUCC32_16730 (holA)
03440 Homologous recombination
JNUCC32_16730 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pajn03032
]
JNUCC32_16730 (holA)
03400 DNA repair and recombination proteins [BR:
pajn03400
]
JNUCC32_16730 (holA)
Enzymes [BR:
pajn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JNUCC32_16730 (holA)
DNA replication proteins [BR:
pajn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JNUCC32_16730 (holA)
DNA repair and recombination proteins [BR:
pajn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JNUCC32_16730 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_delta2
DUF7639
Motif
Other DBs
NCBI-ProteinID:
QOT07837
LinkDB
All DBs
Position
complement(3710010..3711029)
Genome browser
AA seq
339 aa
AA seq
DB search
MDAKAAAKAVKQGDVSSVYLLYGSEKFQMKEFAEFLEAQLIPKEDRDFALVHMDLGEVPI
QTVVEEAETVPFMVQKKLIFVRDTAFFTAAKDNGKVDHRPEALLDYLTNPADYSVIVFMV
GQEKLDERKKVVKAVKKSGVALSFMPLGGDELLRWVDQQVKKGGCTLRAGAAEALVRNAG
TSLQALSGEIEKLCLYAGADGAIDVATVDMLVARSTEQNVFALVEDIANLRLDKALGIYY
ELLKQREEPIKIAALITRQFRIILQVKTLSTQSYSQQQIASQIGVHPYAVKIAGEQARKF
QTARLEGILNHLANLDYQMKTGAVDKVLGIELFLLRLGA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggatgccaaagcggcggccaaggcggtcaagcagggagacgtgtcttccgtctatttg
ctgtacggcagcgagaaattccagatgaaggagttcgccgaatttctggaagcccagctg
atcccgaaagaagaccgggattttgcgctggttcacatggatttaggggaagttccgata
caaaccgtggtagaggaagccgagacggttccttttatggttcagaaaaaactgatattc
gtccgggatacggctttttttacggctgcaaaagataacgggaaagtggatcatcgtcca
gaggctttgctggattatttgaccaatcccgcagattatagcgtgattgtctttatggtg
gggcaggaaaagctggatgagcgcaagaaggtagtcaaggcggtcaagaagtcgggggtt
gccctctccttcatgcctttgggcggggacgaacttcttcgctgggtggaccagcaggtg
aagaaaggcggctgcacgctgcgcgcaggcgcggcggaagcgcttgttcggaatgcggga
accagtctccaggctttatcgggtgaaatcgagaagctgtgtttgtatgcgggagccgac
ggagccattgatgttgcaaccgtggatatgctggtggcgcgcagcacggaacagaatgtg
tttgcgctcgtggaggatatcgccaatctccgattggacaaggcgctcgggatctattat
gagctgctgaagcagcgcgaggagcccatcaagattgcggccctgattaccaggcagttc
cgaatcattcttcaggtgaagacgttatccacccagagctactcgcagcagcagattgct
tcccaaatcggggtgcatccttatgcggtgaagattgctggcgagcaggcccgcaagttt
cagacggcacgtcttgaaggcatattgaaccatctcgccaatctggattaccagatgaag
accggggccgtggataaggtgctcggaatcgagttgtttctgctgcggcttggcgcgtaa
DBGET
integrated database retrieval system
