Paenibacillus sp. JNUCC32: JNUCC32_17565
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Entry
JNUCC32_17565 CDS
T11069
Symbol
ruvA
Name
(GenBank) Holliday junction branch migration protein RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
pajn Paenibacillus sp. JNUCC32
Pathway
pajn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pajn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JNUCC32_17565 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pajn03400
]
JNUCC32_17565 (ruvA)
DNA repair and recombination proteins [BR:
pajn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JNUCC32_17565 (ruvA)
RecFOR pathway proteins
JNUCC32_17565 (ruvA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
RecR_HhH
HHH
IMS_HHH
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
QOT07993
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Position
complement(3905567..3906184)
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AA seq
205 aa
AA seq
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MIDFLRGQVVHLESEYIVLDVQGVGYRVFCPNPYAFAKTEGTVTVFTHHHVREDAILLFG
FPTREEQKLFRKLIEVSGIGPRVALGILGGGSPDHVVSAIYQENISFLIKLPGIGKKTAQ
RMILDLKDKLEGFGNASMMTGLFAIQEPESDDGGSAWSEAREGLKALGYTDSELDKVWLK
IKDSGTSGESVDVLMKRALQQLFAG
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgatcgattttttacggggacaggttgtccacttagagagtgaatatattgtgctggat
gttcaaggcgtaggataccgggtgttttgtccgaatccgtatgcttttgccaaaacggaa
ggaaccgtgacggtcttcacccatcatcacgttcgtgaggatgccattctgctgtttggg
tttccgacgcgggaggagcagaagctgttccgtaagctgatcgaggtctcgggaatcggc
ccgcgcgtggcgctcggcatactcggcggaggatctccggatcatgtggtttccgcgatc
tatcaagagaatatatccttcttgatcaaacttccgggaatcggcaagaaaacagcgcag
cgcatgattttggatctaaaggataagcttgagggcttcgggaatgcgagcatgatgacc
ggtctttttgccatccaggagccggaatcggatgatggcggctcggcatggtccgaggct
cgcgagggcctgaaggcgcttggttatacggatagcgagctggataaagtctggctgaag
atcaaggattccggcacaagcggcgaatccgtcgatgtgctcatgaaacgggcactgcag
cagctattcgctggatag
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