Paenibacillus sp. JNUCC32: JNUCC32_18515
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Entry
JNUCC32_18515 CDS
T11069
Name
(GenBank) S-layer homology domain-containing protein
Organism
pajn Paenibacillus sp. JNUCC32
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Invasin_D3
Big_1
Filamin
RCC1_2
RCC1
SLH
Glyco_hydro2_C5
Motif
Other DBs
NCBI-ProteinID:
QOT08158
LinkDB
All DBs
Position
complement(4100823..4107665)
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AA seq
2280 aa
AA seq
DB search
MRRLKKIAMLLLAFLMIMPNLPQPAHAASAAPAGIKGIGAGYLHSLLIAGDGTVWTMGDN
SAGALGNGTTDNAFRPVPVTKFDGTPLGNAKFVTGGGYFSVALLNDGTVWAWGRGVYGTL
GNGASDNQHRAVQVTESGGGPLTNVRSIAAAYNHVLAIKEDGSAWGWGSNSSSTLTDYYD
VINPRAVRIKASSGSYLNDVKAIGAGEYHSVALLNDGTVWAWGYGGFGALGNGSTADSDY
PVQVIDSAGQPLTGIADIQGNRLGGMALKGDGTVWAWGYNENFNLGNPGLTSSNTAIQVQ
QAGSLPLTNVVRISGGGRMSMALKSDGTLWWWGMQNRNLQVATKLLGDADLFAAGDNHAL
AIKADGTVWGAGWTSRGELGISDASPLVYYTSALQVYPARTQISASPASIDADGTSKTTV
TVTLKEGSNYNIGRSEGTVQLNTTAGTLGPVTDHGDGTYTAELTSSKTTGTATITGIING
YPMSASGTVMFNPLGASAVTSTVTASPASIPADGSSISTVTVQLKDSNGNPLTTSGGTVQ
MKTTAGTLSGVTDRKNGTYTAQLKAPVSVGTATVTAELGGTPIAQKAAVTFVPGAASASA
STISLGQNTLTAGSGSTAVTVRLKDAHGNPLVSGGDTVTIQSSHGTAGRVTDHGDGTYTA
VLTAGTAAGSGTVSAAVNGATMQQKAAIQILPAGASTQTSELSAAPVSIVADGSSKTMLT
VRLRDAYGNALTASAGTVSMSTSGGTIGAVSDKGNGTYTATLTSASMTGTAEVSASLNGS
LIKQTAVVSFVPGAASADKSSLDSASGSLQAGSGTTTLTVKLKDARGNDLVTGGDAVTMQ
ASLGSIGSVADQGNGTYTATLTAPTATGMSVVSASVNGVRLAQTTNVSIVPGPVSLSAST
ISAANASVPANGTGTTRVTVELKDTHGNRLTASGGTVTLSATAGSLSAVTDHGDGTYSAT
WTAPTTAGTATVSGFVNGSALAGKASLNFVAGAASPSATSLSIDPASITADGVSTAVITV
QAKDAYGNPVTQGGDAVSVETSGGTLSAVTDRGNGTYTATVKAPTTAGKAVVRAELNGKT
VTQTADIAYVPGAASPATSLLTAGASALPADGSSTTALTVQLKDVYGNNLTSGGDRVSLS
ATAGSIGAVTDHGDGTYSAVFTAPTVAGPATITATVNGAKLLQTASADFEPGAASARESL
LTAASPAMPADGASTTTVTLQLKDAFGNELKTGGDTVVLTTTAGTLGSVQDHGDGTYSAM
LTAGTVSGSAVVSGAVNGVPLEHPVSVDLLAGAASATESIIETDSKAITVGGSTSTVVTI
RLKDAFGNALTAGGDKVLLETTAGTLGLMTDHHDGTYTSILTAGTAAGEAVITGSVNDVP
LAHTASVQFMPGPASADQTILSADRAVVTADGLSRSIVTVQLKDAYGNELRSDAGSLQLK
LASTLGLLTEPKYEADGRYTAGVSSNRAGTAVITGTLDGIRIASAVTVSFEPGEPSALRS
TVDADRTGLTADGKQSARITVQLKDAAGNTVPDDGGPADIRIHSSIGTVSAAVYEAEGRY
TASLISTEAGIAVITASVDDSELADTAEVEFLPGPALAAASELSADSGAIPANGSAASTI
TISVRDAFGNNTGSGADIRLETTLGTVTEATYRENGVYTAEVRSTEPGVADIRAWIGGEP
IRDGVQVTFADGIWFTPPSYRLQIGESVRTVVEVTYGDATSDVTADARFQYDDGLIRVAR
AEDGSWYVTGLRTGRTVMQAVYEADAGRLTAAAPVTVYAVPTGLTLDASRYEVREGEYRQ
IRVTAHYSDGTSSDVTAEAAYRLADRGYASLNAAGRLHGIRSGKSSMTVTYEGLSTTAEV
AVLPPAHSGGDPGSGGSPGNAVGLPGNAGGVKPPAGEDRGLTVDLVLDGESGRTITLEHE
QLSSGRIVIETRGGTKEWSLLMKPAVVERLQELVSGAVLEWRTPQGALVFSLAELGELPS
DLSAAFIGLTIRTADDETETRLVELSRKTGASMRLKPFSVSLNAWKPDGTAQPLADGRLS
ATFAPSERMLADGRYLTAAYLDEAAGQWKHVPARFASAENALLTLKASGTYTVLESRRAF
TDMSGHWAKADAELLANKLIVQGTEGGRFEPGRSITRAELAAMLVRMLGIHPSGAAAVPA
SFNDVAGRWFAADVQAAYKAELIQGYADGSFRPDAAVTRQEMIVMIARAMEATGLGKEAE
GAPLQYADDVKLAAWARGAVDRLSQAGLLTGDQANMLAPKRAATRAETAAILARMLQSGM
NT seq
6843 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcagattgaaaaaaatcgcgatgcttctgctcgcattcctgatgatcatgccgaat
ctgccgcagccggcgcatgccgcatccgcggcccccgccggcatcaaaggaatcggagcg
ggataccttcattccttgctgattgccggagacggcacggtttggacgatgggggacaac
agtgcgggagcactgggcaacggcacaacggataatgcattccgacccgtaccggtgacc
aaattcgacggtacgccgctgggaaacgcgaagttcgtgacgggcggaggctatttctcg
gtcgcgctgctgaatgacggcaccgtatgggcctggggcaggggagtctatgggacgctc
ggcaacggtgcatcggataatcagcatcgtgccgtgcaggtaacggagtccggcggcggg
ccgctaacgaatgtacgcagcatcgccgcggcttacaaccatgttctggccatcaaggaa
gacggatcggcttgggggtggggatccaattccagcagtacgcttaccgattattatgac
gtcatcaatccccgggccgtacgcatcaaggcgtcaagcggatcttatcttaacgacgtg
aaggccataggggcgggcgaatatcattccgttgcgctgctgaacgacggaacggtatgg
gcctggggctacggaggcttcggagcgctgggcaacggatcaacggccgactccgactat
ccggtacaggtgatcgattctgccggacagcctttaaccggcattgccgatatccaaggc
aatcgattgggcggcatggctctgaagggagacggaaccgtctgggcttggggatacaat
gagaattttaacctgggcaacccgggactgacctcttccaacacggcgattcaggttcag
caggcaggttccttgccgcttacgaatgtagtccggatatccggcggcggccgcatgagc
atggctctgaaaagcgacggaaccctgtggtggtggggcatgcagaaccggaacctccaa
gtcgcgacaaagctgctcggcgacgcagatctattcgctgccggcgacaatcatgccctt
gcgattaaagcggacggtaccgtatggggcgcaggctggaccagcaggggagaactgggc
atatcggatgccagccctttggtatattacacgtctgcgctgcaagtatatccggcccgg
acgcaaatcagcgccagtcccgcttccatcgacgcggacgggaccagcaagacgacggtc
accgtaacgctcaaggaaggaagcaactataacatcggcaggagcgaagggaccgttcag
cttaacacgacagcgggcacgctcggtccggtcaccgatcacggggacgggacgtatacg
gctgaactgacgtcgtccaagacgaccggaaccgcaacgattacgggcatcattaacggt
tatcccatgagcgcaagcggcacggtgatgttcaatccgcttggcgcttcggccgtcact
tcaacggtcaccgcgagcccggcatcgattccggcggacggcagcagtatctccaccgtg
acggtgcagctgaaggatagcaacggaaatccgttgacgacgagcggcggtaccgtgcaa
atgaagacgaccgccggtacgctgtccggcgtgacggaccggaagaacgggacgtacacg
gcacagctgaaggcgcccgtttccgtcggtacggcaaccgtaacggcggagctgggcgga
acgccgatcgcgcagaaggcagcggtcacgttcgtcccgggagccgcatcggcttcggca
tccacgatcagcctggggcagaacacgctcacggccggaagcggaagcacggcggtgacc
gtccgcttaaaggatgcgcacggcaatccgctggtgtccggaggcgacacggtaacgatc
cagtcctcgcacggcacggccgggagggtaaccgaccatggggacgggacctatacggct
gtgctgacggcaggcacggccgccggcagcgggaccgtcagtgccgcggtgaacggggcg
acgatgcagcagaaggccgcgattcagattcttcccgcgggagcgtccacgcaaacctcg
gaactgtcagcggctcccgtctcgatcgttgcggacggcagcagtaaaacgatgctgacg
gtacggctccgggatgcctacggcaacgcgttgacggcttcagcaggtaccgtgtccatg
agcacaagcggcggcaccatcggggccgtgtccgacaaaggcaacggcacctataccgcg
acgctgacctcggcctctatgaccggaaccgctgaagtatcagccagtttgaacggttct
ctgatcaaacaaacggccgtggtctcgttcgtcccgggggccgcctccgcggacaagtcc
agccttgactctgcttcaggcagtctccaggccggatcggggaccacgacgttaaccgta
aaattgaaggatgcgcgaggcaatgatctcgtgacaggcggcgatgccgtgacgatgcag
gccagcctcggctccatcggttccgttgcggatcaaggcaacggaacgtataccgcgacg
ctgacggcgccgacggcaacgggcatgtcggtcgtatcggcatcggttaatggcgtgagg
cttgcgcaaacgacgaacgtaagcatcgtgcccggccccgtgtctctgtcggcatccacg
atcagcgccgcgaacgcaagcgtaccggctaacggaaccggcacgaccagggttaccgtg
gagctgaaggatacgcatggcaatcgtttgactgcttcgggcggtaccgtaaccttgtcg
gctacggcaggcagcctgagtgcggtaacggatcacggcgacgggacgtacagcgcgacc
tggacggcgcccacgaccgccggaaccgcaacggtgtcgggttttgtcaacggctcggca
cttgccggcaaggcaagcttgaacttcgttgccggagcggcatcgccatcagcgacgagc
ctgtcgatcgacccggcctcgattacggcagacggagtcagtacggccgtcattacggtc
caagcgaaggatgcctacggcaacccggtgacgcaaggaggcgacgcggtatccgtcgaa
acaagcggaggcacgctctccgccgtcacggaccgcggtaacggcacttatacggctacc
gttaaggcgccgacgaccgccggcaaggccgtcgtccgggccgagctgaacggcaagacc
gtcacgcagacggcggacatcgcgtatgttccgggcgccgcttccccggcaacatcgctc
ctcacagcgggggcgtccgcgctcccggctgacgggtcaagcacaacggcgctgaccgtg
cagctgaaggacgtctacggcaacaacctgacgtccggcggcgacagggtgagcctgagc
gcgaccgccggctcgatcggagcggtaacggatcatggggacggcacatactcggccgtg
tttacggcaccgacggttgccggtccggcaacgatcaccgcgacggtgaacggtgcgaag
ctattgcagaccgcgtccgctgattttgagcccggagcggcttcggcgcgcgaatcgctg
ctgacggcagcatccccggcgatgccggctgacggcgccagcactacaaccgtgacgctg
cagctgaaggatgccttcggcaacgaattgaagacgggcggtgatacggtcgtgttaacc
acgacggccggaacgttgggcagcgttcaagaccatggcgacggcacgtattcagccatg
ctgacggccggtacggtttccggttcagccgtcgtatcgggtgccgtaaacggcgtgccg
ttggagcaccccgtatcggtggatcttctcgccggggcggcatccgcgaccgaatcgatc
atcgagacggacagcaaagcaatcaccgtgggcggcagcacgtcaacggttgtcacgatt
cggctgaaggatgccttcggcaatgcgttgaccgcaggaggcgacaaggtcctgctggag
acgacggccggaacgctgggattgatgacggatcatcatgacggtacgtacacgtccata
ttgacggccggcacggcggcaggcgaggccgtcatcacgggaagtgtcaacgatgtgccg
ctggcgcacacggcgtcggtgcagttcatgcctggcccggcttcggcggaccaaacgata
ttgtcagccgatcgggcagtcgtcaccgctgacgggctaagccgttcaatcgtgacggta
cagctgaaggacgcttacggaaacgagctccgctccgatgccggatcgctccagcttaag
ctggcgtcgacgcttggcctgctgacggagccgaagtacgaagcggatggccgttacacg
gccggcgtttcatcgaatagggccggaacagccgtcattaccggaaccttggacggcatt
cggatcgcctcggcagtgacggtatccttcgagccgggcgagccttcggcgcttcgctcg
acggtcgatgcggaccggaccgggctgacggccgacggcaagcaatccgcgcggattacg
gtgcagctgaaggacgccgcgggcaatacggttccggatgacggcgggcccgcggacatt
cggattcattcctcgatcggcaccgtttccgcggctgtatacgaggccgaggggcggtac
acggcatcgctgatctcaaccgaggccggcattgccgtcattacggcatccgtggacgat
agcgagctcgcagacacggcggaggtcgaatttctgccgggtcccgctttggccgctgca
tcggagctgtccgccgacagcggggcaatcccggctaacggctctgctgcctcgacgatt
accatctcagtgagggatgcctttggcaacaacacggggagcggggccgatatccggctt
gaaacaacgcttggcaccgtgacggaagccacgtaccgcgagaacggcgtgtatacggcg
gaagtccgttcaaccgagccgggagtggccgacattcgcgcctggatcggcggcgagccg
attcgggatggcgtgcaggtgacctttgccgacggcatatggtttacgccgccctcgtac
cgacttcaaatcggcgaatcggtgcgcacggtcgtcgaggtgacttacggggatgctacc
tcggacgtaaccgcagatgcccgctttcaatatgatgatgggctgattcgggtggcgcgg
gccgaggacggttcctggtatgtcacaggtcttcgtaccgggcgtaccgtcatgcaggcc
gtttatgaggctgatgccggaaggctgacagccgccgcccccgtcacggtttatgccgtg
ccgaccggattgaccctggatgcttcccggtatgaagtgagggagggcgaatatcgccag
atccgggtaactgcacattactcggacggcacgtcctccgatgtgaccgcggaagctgca
taccgtcttgcagacagaggctatgcatccctgaatgcagcgggccggctgcacggcatc
cggtcagggaaatcgtccatgaccgtgacctacgaaggtttaagcaccacggccgaggtt
gccgttttgccgccggctcactcaggcggtgatcctggttccggcggaagcccgggcaac
gccgtcggcctgccgggcaatgccggcggggtgaaaccgcccgcaggggaagatcgcggt
ctcaccgtcgatctggtgctcgacggggagtccggccggacgatcacgctcgagcacgaa
cagctgagttcaggccgcatcgtgattgaaacgaggggcggaacgaaggaatggtcgctg
ctcatgaagcctgccgtcgtggagcggctgcaggagcttgtcagcggcgcggtgttggag
tggcgcacgccgcagggcgcattagtcttctcactggctgaacttggcgagctgccatcg
gatttatctgcggctttcatcgggctcacgatcagaacggccgatgacgagacggagacg
agactcgtggagctctcgcgaaaaacgggagcgagtatgcggcttaagccgttctccgtg
tcgctgaacgcgtggaagccggacggaacggcgcagccgctggcagatggccgattatcc
gcaaccttcgcgccttcagagcgaatgctggccgacggccggtatttgacggcagcttac
ctcgatgaagccgccggacaatggaaacacgttccggcccgtttcgcttcggccgagaat
gcccttctcactttgaaggcatcgggaacctataccgttctggagagccgccgcgcattc
accgacatgagcgggcattgggctaaagccgacgccgaactgctcgcgaacaagctcatc
gtgcaggggacggagggcggccgttttgagccgggccgctccatcacgcgggcggagctt
gccgccatgctggtcaggatgctggggatccatccgagcggagcggccgcggttcctgct
tcgttcaacgacgtggcgggccgatggtttgcagccgacgttcaagccgcttataaggcg
gaattgatccaagggtatgcggacggcagcttccgtccggatgcggccgtgacccgtcag
gaaatgatcgtcatgatcgcaagggcgatggaagcgacgggacttggcaaggaggccgag
ggagcgccgctgcaatatgccgacgatgtcaagcttgcagcatgggctcgcggggcagtc
gaccggctttcgcaggcaggactgttgacgggcgaccaagcgaacatgctggcgccgaag
cgggcggctacgcgcgcggaaacggcggccatcctggcaagaatgctgcaatcgggcatg
tga
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