Paenibacillus sp. JNUCC32: JNUCC32_23635
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Entry
JNUCC32_23635 CDS
T11069
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pajn Paenibacillus sp. JNUCC32
Pathway
pajn00040
Pentose and glucuronate interconversions
pajn01100
Metabolic pathways
pajn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pajn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
JNUCC32_23635
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JNUCC32_23635
Enzymes [BR:
pajn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
JNUCC32_23635
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CBM77
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
QOT09127
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Position
complement(5365637..5367694)
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AA seq
685 aa
AA seq
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MKNSVAKVTGMVLLFSLALALIAGGWVNKTTVDAAGLSIIGGGGWNETAYIEWSPVSNAE
GYNVYVKHANAPDSSYQQMDNELIRQYPSYWRADAVGLAAGNYVMKVEARLSDGSTVSVV
SNNLSVAPHDRYGFAFSSDSPYGTGSGAYNDDGTLKDGAQVIYVTSETARTVTLDVKINS
SGGVQTGVGIGEILTLRQKGYDTTPLAIRFIGKVTDDDMSGQLNSSGYLQVKGKNNYSEM
NMTIEGIGDDAYAYGWGLLLRYVGNVEVRNLGLMLFPDDGISMDTGNVNVWVHNNDLFYG
TAGGDADQAKGDGSTDLKKGSTYITISYNHYWDSGKAALVGLSESEEFFVTFHHNWFDHS
DSRHPRIRLASVHIYNNFYDGVSKYGVGVTTGASAFVESNYFRHAKYPMLSSLQGTDALG
EGTFSGEDGGVIKAYNNRIVDADSLIYANSNTGTAPANVTSFDAYLASSRNETVPSSYKA
FVGGTAYNNFDTTVNTGVNSADIDNVSDVEQIVTAQAGRLNNGDFTWEFNDAVDDTSYAL
NTALMAKISSYTSGLVSVGGNSTGAEPEPEPEPSTGEQVHNFTTSGLASDFFNIVGNLST
TKGTVAYNGLTLTQCLKIESSTRITFTSTETATLTLVFNSADGTKIKIDGTSYPMTNGVV
RVSLAPGAHTITKDHTTNLFYMALE
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacagcgttgcaaaggtaaccggcatggtattgttgttttctctggcgctagct
ctcatagcgggaggatgggtgaataagacaacggtcgatgctgccggtctttcgattatc
ggcggcgggggctggaatgaaacggcgtatatagaatggtcacccgtgagtaatgcggag
ggatacaatgtctacgtgaaacacgccaatgcgccggattccagctatcaacaaatggat
aatgagctgatccggcaatacccttcctattggagagcagatgccgttggactcgcagca
ggaaattatgtgatgaaggttgaagccaggctgtcggacggttcaacggtaagtgtcgtt
tcgaataacctatccgtagcgccgcatgatcgatacggatttgctttttcctcagactcg
ccatacgggactggctcgggtgcctacaatgatgacggtacgcttaaagatggtgcacaa
gttatttatgtgacctccgagacggcacgaaccgtaacccttgatgtgaaaatcaacagc
tcaggcggggttcaaacgggcgtggggatcggcgagattttgacgctaagacaaaaaggc
tatgacacaacccctcttgcgatccggtttattggaaaagttaccgatgacgacatgagc
ggacagctgaatagcagcggctaccttcaagtaaaaggcaaaaacaattactcggaaatg
aatatgacgatcgaagggatcggagacgacgcttatgcttatgggtggggattgctcctt
agatacgtagggaatgtggaagtaagaaacctcgggctcatgttgtttcctgatgatgga
atttccatggatacaggaaacgtcaacgtgtgggtgcataataacgatctattttatgga
accgcaggaggagatgccgaccaggccaagggcgatggttcaacggatctgaaaaaagga
tcgacctatattacaatctcctacaatcactactgggattcgggaaaagcggctttggtc
gggttgagtgaatcggaggaattctttgtcaccttccaccataactggtttgatcactcg
gactcccgccatccgcgaatccgattggcatcggttcacatctataataacttctatgac
ggagtctcaaaatatggggtcggtgtgacaacgggagcttcagccttcgtggaatccaat
tactttagacatgccaaatacccgatgttgagctccttgcaaggtaccgatgctttaggg
gaagggaccttttcgggcgaagacggaggcgtgattaaggcctataacaataggatcgta
gatgcggacagcctgatttatgcaaattccaataccgggacagctccggcaaatgtaacc
tcattcgatgcatacttggcttcgtcaagaaatgaaaccgtaccaagctcatacaaagca
ttcgtgggaggaacggcttataataacttcgatacaaccgtcaatacgggagtgaatagc
gccgacatcgataacgtgagcgatgtagaacagattgttaccgcacaagccggacgcctg
aataacggggacttcacctgggaattcaatgatgccgttgacgacacatcctatgccctc
aatacagctttaatggctaaaataagcagctacaccagcgggcttgtatccgtaggcggg
aattcaaccggggcggagccggaaccagaaccagagccgtccaccggagaacaagttcac
aactttacaacgtccggattggcaagcgatttctttaatattgtagggaatctctccaca
accaagggaactgtggcgtataacggcttgacgctaacccaatgtttgaaaatcgagagt
tcaacccgtattacctttacctctacggaaacggcaacattaacattagtgtttaattcg
gcagacggaaccaagatcaagattgatggaacgagttatccgatgacgaatggtgttgtc
agggtgtcgcttgctccaggagcgcatacgattaccaaagatcatacgacgaatctattt
tatatggcgttggagtag
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