Paenibacillus sp. JNUCC32: JNUCC32_24865
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Entry
JNUCC32_24865 CDS
T11069
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pajn Paenibacillus sp. JNUCC32
Brite
KEGG Orthology (KO) [BR:
pajn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pajn03032
]
JNUCC32_24865
03036 Chromosome and associated proteins [BR:
pajn03036
]
JNUCC32_24865
03400 DNA repair and recombination proteins [BR:
pajn03400
]
JNUCC32_24865
DNA replication proteins [BR:
pajn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JNUCC32_24865
Chromosome and associated proteins [BR:
pajn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
JNUCC32_24865
DNA repair and recombination proteins [BR:
pajn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
JNUCC32_24865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
QOT09338
LinkDB
All DBs
Position
complement(5628145..5628417)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTDLINNISGKSGLTKKDVENVLNGFLGEITEALANGDKVQLIGFGTFETRKRAGRTG
RNPQTGNTIEIPESNVPAFKAGNKLKEAVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacagatctgatcaacaacatttccggtaaaagtggattgactaaaaaagac
gtagagaacgtcctgaacggcttccttggcgaaatcacggaagctttggctaatggcgat
aaagttcaattgatcggcttcggtacattcgaaactcgcaagcgcgctggacgcacaggc
cgcaacccgcaaacaggcaacacgatcgaaattccagaatccaacgttcctgcgttcaag
gcaggcaacaagcttaaagaagctgtaaaataa
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