Paenibacillus sp. JNUCC32: JNUCC32_27635
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Entry
JNUCC32_27635 CDS
T11069
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
pajn Paenibacillus sp. JNUCC32
Pathway
pajn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pajn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JNUCC32_27635 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pajn03400
]
JNUCC32_27635 (uvrB)
DNA repair and recombination proteins [BR:
pajn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JNUCC32_27635 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JNUCC32_27635 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UvrD-helicase
AAA_19
AAA_7
AAA_25
AAA_22
UFL1
Mal_decarbox_Al
nSTAND_NTPase5
AAA_5
Motif
Other DBs
NCBI-ProteinID:
QOT09859
LinkDB
All DBs
Position
6260230..6262221
Genome browser
AA seq
663 aa
AA seq
DB search
MSDLVVSTKSFEIQSEFQPQGDQPTAIDALVEGLRQGKKHQTLLGATGTGKTFTIAQTIA
KVNRPTLVIAHNKTLAAQLASEFKEFFPNNSVDYFVSYYDYYQPEAYIPSSDTYIEKDSS
INEEIDKLRHSATSSLFERRDVIIVASVSCIYGLGSPHEYGEMLLSLRVGMEKPRNEILS
RLVDIQYQRNDINFVRGTFRVRGDVVEIFPASKGEHAVRVELFGDEIERITEIDVLTGEL
VGEREHIAIFPASHFVTREETMRVALVNIERELEERLELLRSEGKLLEAQRLEQRTRYDI
EMMKEVGFCSGIENYSGPLTFREPGATPYTLLDYFPDDMLFVIDESHVTLPQIRAMYNGD
RARKTVLVDHGFRLPSALDNRPLKFEEFEEKVNQIIYVSATPGPYEMEHCDTMVEQIIRP
TGLLDPIIDVRPTEGQIDDLIGEIHDRVDRDERVLVTTLTKKMAEDLTDYLKEIGIKVRY
MHSDIKTLERMQILRDLRLGTFHVLVGINLLREGLDLPEVSLVAILDADKEGFLRSDRSL
IQTIGRAARNSEGKVIMYGDKITDSMDRAIKETERRRSIQVAYNEEHGITPQTIRKKVRD
VIEATKVAEGKADYLVGEGQKMSKKERQKLIQRLEAEMKEAAKNLQFERAAELRDALLEL
QAE
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatttagttgtcagtaccaaatcctttgagatccagtctgaattccagccgcag
ggcgatcagcccacggctattgatgcgttggtcgaaggactccgccaagggaaaaaacat
cagacgctgctaggtgcaacaggaacgggtaagacgtttacgatcgcgcagacaatcgcc
aaggtaaaccgtcccacactcgtcattgcgcataacaagacgctggctgcgcagctggcc
agtgagtttaaggaattcttcccgaacaactcggtggattatttcgtgagttattacgat
tactatcaaccggaagcctacattccttcctccgatacgtatatcgagaaggattccagc
attaatgaagagatcgataagcttcgccactccgccacgagctcgctgttcgaacggcgc
gacgtcatcatcgtggcgagcgtatcctgcatatacggtttgggttcgccgcacgagtac
ggagaaatgctgctttcgctccgggtgggcatggagaagcctcgcaacgagattctgtcg
cggctggtcgatatccaataccagcggaacgatatcaacttcgtgcgcggcacgttccgc
gtgcgcggggatgtcgtcgagatcttcccggcctcgaagggagagcatgccgtccgcgtc
gagctgttcggcgacgagatcgaacggatcacggagatcgacgttttgacgggcgagctg
gttggggaacgcgagcatatcgccatcttcccggcgtctcacttcgtcacccgcgaagag
acgatgcgggtagcgctcgtgaatatcgaacgcgaactggaagagcgccttgaactgctg
cgctcggaaggcaagctgctggaggctcagcggctggagcagcgcacccgttacgacatc
gagatgatgaaggaagtcggattctgctccgggatcgagaactattcgggtcccctgacc
ttcagggagcctggggctacgccatatacgcttctcgattacttcccggacgacatgctg
ttcgtcattgacgagtcgcacgttacgctgccgcaaatccgcgcgatgtacaacggtgac
cgggcacgtaaaacggtgctggttgatcatggcttccgcttgccgtccgcgctcgataac
cggccgctgaagttcgaggaattcgaggagaaggtgaaccagatcatctatgtatcggcc
acgccgggaccgtatgagatggagcactgcgatacgatggtcgaacagatcatccggccg
acaggcctgctcgatccgatcatcgacgtgcgcccgaccgaagggcagatcgatgacttg
atcggcgagatccatgaccgcgtggaccgggacgagcgcgtgctcgtgaccacgctcacg
aagaaaatggccgaggatttgaccgattacctgaaggaaatcggaatcaaggtccgttac
atgcactccgatatcaaaacgctggagcggatgcagatcctgcgagatctgcggcttggt
acattccacgtgctggtgggtattaaccttctacgggagggtcttgacctgccggaggtt
tccctcgtagcgattctggatgcggacaaggaaggtttcctgcgttccgaccgctcgctc
atccagacgatcggacgggcggcccggaactcggaaggcaaggttatcatgtacggcgac
aagatcaccgattcgatggatcgggcgatcaaggaaaccgagcgccgtcgcagcatccag
gttgcttacaacgaggagcacggcatcacgccgcagacgatccgcaagaaggtgcgcgat
gtcatcgaagcgacgaaggtcgccgagggcaaggcggattacctggtgggcgaaggacag
aagatgtcgaagaaagagcgtcagaagctgatccaacgcctcgaggccgagatgaaggaa
gcggcgaagaatttgcaattcgagcgtgcggccgagcttcgtgacgcgctgctggaactg
caagccgagtaa
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integrated database retrieval system
