Paenibacillus sp. JNUCC32: JNUCC32_27795
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Entry
JNUCC32_27795 CDS
T11069
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pajn Paenibacillus sp. JNUCC32
Pathway
pajn03420
Nucleotide excision repair
pajn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pajn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JNUCC32_27795 (pcrA)
03430 Mismatch repair
JNUCC32_27795 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pajn03400
]
JNUCC32_27795 (pcrA)
Enzymes [BR:
pajn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JNUCC32_27795 (pcrA)
DNA repair and recombination proteins [BR:
pajn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JNUCC32_27795 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
JNUCC32_27795 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
DEAD
Terminase_6N
Glyco_hydro_64
Motif
Other DBs
NCBI-ProteinID:
QOT09887
LinkDB
All DBs
Position
6302688..6305018
Genome browser
AA seq
776 aa
AA seq
DB search
MHSIDIHDAVRRLNPQQRQAVEATDGPLLIMAGAGSGKTRVLTHRIAYLIATRKAAPWSI
LAITFTNKAAREMQERVSKLVGREGQDIWVSTFHSMCVRILRKDIERIGFTSNFSILDST
DQLSVIRNVMKHHNIDPKKFEPKAIQAAMSAAKNELISPQQYEQKAGDYFETLVAKVYTE
YQKRLKSNNSLDFDDLIMTTIQLFKEVPEVLDFYQRKFQYIHVDEYQDTNRAQYMLCRML
ADSHHRICVVGDSDQSIYRWRGADITNILNFEQDYPEARTILLEQNYRSTANILNAANNV
IGLNTGRKPKNLWTEQGEGPKIKVFRGDTEHDEGYFVTSEISKNIKDGKSYQDHAILYRT
NAQSRVIEEILIKSDIPYQIVGGIKFYDRKEIKDMLAYLRLISNPDDDISLTRIINVPKR
SIGDTTVAKLAAAAGERGISIFRVLEIVDDLGFAGRTRNALVGFYDMIAALSRMVEFLSV
TELTEKILEMSEYRLELQNENTIESRSRLENIDEFLSVTQEFEKNNEDKSLVSFLTDLAL
IADIDSMNDDEEDRDDAVVLMTMHSAKGLEFPVVFIIGMEEGVFPHSRAFMDNEELEEER
RLAYVGITRAEKQLFLSCARMRTLFGRTTANMPSRFLEEIPEELKEDTQMAHDRYRRGGG
SNVGGSYAGRGFGGGGGSNFGGSRSVDLSLSGSTASAQAAPKSRVTMTTGGSSRPAAASG
SGDFKAGDKVAHGKWGTGTIVAVKGSGNDMELQIAFPAPVGVKRLLAGFAPITKVE
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgcattccattgacatacacgacgccgtcagacgtctcaatccgcagcagcgccaagcc
gttgaagcaaccgacggaccgctgctcattatggccggagccggttccggcaagacgcgg
gtgctgacgcaccggatcgcgtacctgatcgccacgcgcaaagccgcaccatggagcatc
ctggcgattacgtttacgaataaggcagcacgcgagatgcaggagcgggtatccaagctg
gtcggccgggaaggccaggacatctgggtatcgacgttccactccatgtgcgtacggatt
ttgcgcaaagacattgagcggatcggctttacttcgaacttcagtattttggattcgaca
gaccagctgtccgttattcggaacgtgatgaagcatcacaacatcgatccgaagaaattc
gagccgaaggcgatccaagcagccatgagcgcggccaagaatgagctgatctccccgcag
cagtatgaacagaaagccggggactattttgaaaccctcgttgccaaggtctacaccgaa
taccagaaacgcttgaagagcaacaattcgcttgacttcgacgacctgatcatgaccacg
atccagctgtttaaggaagtgccggaggttctcgacttctaccagcgcaaattccagtac
atccacgtggatgaataccaggataccaaccgggcgcagtacatgctctgccgcatgctg
gcggacagccatcaccgcatctgcgttgtcggggacagcgaccagtcgatctatcgctgg
cgcggcgcggatatcacgaacatcctgaattttgagcaggattacccggaggctcgcacg
attctgctggagcagaattaccgttcgacagcgaacattttgaacgctgccaacaatgtt
attggcctgaacacgggccgcaagccgaagaatctgtggaccgagcaaggcgaaggaccg
aagatcaaagtgttccgcggggatacggagcatgatgaagggtattttgtcacctcggaa
ataagcaagaacatcaaggacggcaagagctatcaggaccacgcgattctgtatcggacc
aacgcgcagtcccgggtgatcgaggaaattctgatcaagtcggatattccgtaccagatc
gtcggcggcatcaagttctatgatcgcaaagagatcaaggacatgcttgcttatctgcgc
ctgatttccaacccggacgacgatatcagcttgacgcggatcattaacgtgcccaaaaga
agcattggcgacacaaccgtcgcgaagctggctgcagctgccggagagcggggcatctcg
atcttccgcgtgcttgaaatcgtggacgacctcggttttgccggacggacgcgcaatgcg
ctggttggcttctacgacatgattgccgcgctcagccggatggtcgagtttctgtcggtg
acagagcttacggaaaaaattctcgagatgtccgagtaccgcctcgagctccagaacgag
aatacgatcgaatccagatcacgcctcgagaacatcgacgagttcctgtcggttacgcaa
gagttcgagaagaacaacgaggataagtcgctcgtctccttcctcacggatcttgcgctg
atcgcggacatcgattcgatgaacgatgacgaggaagatcgcgacgatgctgtcgtgctc
atgaccatgcacagcgccaaaggcctggagttcccggtggtattcatcatcggcatggag
gaaggggtattcccgcacagccgtgcctttatggataacgaggagctggaagaagaacgc
cgacttgcttatgtgggcatcacgcgcgccgagaagcagttgttcttatcctgtgcgcgc
atgcgtaccttatttggccgcacgacggcgaacatgccatcgcgattcctggaggaaatc
ccggaagagctgaaggaagacacccagatggcgcatgaccgctaccgccgaggcggcgga
agcaatgtgggcggatcctatgcgggacgcggcttcggcggcggtggaggcagcaacttt
ggcggcagccgcagcgtagacctctccctcagcggatcgacggcttccgcgcaagccgcg
ccgaagagccgggtgacgatgacaaccggtgggtcatcccgtccagcggctgcctcgggc
agcggcgattttaaggccggcgacaaagtcgcccatggcaaatgggggaccggtacgatc
gtagcggtgaagggcagcggcaatgacatggaattgcagattgcattcccggcgcctgtg
ggcgtgaaacgcctgcttgccggctttgcgccgattacgaaggtggaataa
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