Paenibacillus sp. JNUCC32: JNUCC32_28220
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Entry
JNUCC32_28220 CDS
T11069
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pajn Paenibacillus sp. JNUCC32
Pathway
pajn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pajn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JNUCC32_28220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pajn03021
]
JNUCC32_28220
03400 DNA repair and recombination proteins [BR:
pajn03400
]
JNUCC32_28220
Enzymes [BR:
pajn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JNUCC32_28220
Transcription machinery [BR:
pajn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JNUCC32_28220
DNA repair and recombination proteins [BR:
pajn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JNUCC32_28220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
PASTA
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QOT09963
LinkDB
All DBs
Position
6387868..6388812
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVDVNEEGTYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSIQIDG
VLHEFSTIPGVMEDVTEVILNLKALSLKIHSDEEKVFEIDAEGEGVVTAGDIRADSDVEI
LNPDLHIATLGPGARLHMRIFASRGRGYVQADRNKRDDQPIGVIPVDSIYTPISRVNYGV
ENTRVGQVTNYDKLTLEIWTDGSIRPEEAVSLGAKILTEHLFLFVGLTDEAKDAEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTTKTEEDMMKVRNLGRKSLEEVQ
EKLEELGLGLRTEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtgattgaaatcgaaaagccgaaaattgagaccgttgatgtcaatgaagaaggaacctat
gggaaattcgttgttgagcctctagagagaggatatggcacgacgctggggaactcgctt
cgccgcatcttgttatcctcactcccgggtgcagccgtcacatcgattcaaatcgatggc
gtgcttcatgaattctccacgattccgggtgtcatggaagacgtgaccgaggtcatcctg
aacctgaaagctttgtctctgaaaattcattccgatgaagagaaagtgttcgagattgat
gcggagggtgaaggggttgttactgctggtgacatccgtgcggatagtgatgtggagatt
ctgaatccggatcttcatattgcgacgctgggccctggagcaagacttcatatgcgtatt
tttgccagtcgcggtcgtggctatgtccaggcggatcggaacaaacgcgatgaccagcct
atcggcgtcattcccgtcgattcgatctacactccgattagccgtgttaactacggcgtg
gaaaatacgcgtgttggccaagtaaccaactacgacaaactgacgcttgaaatttggacg
gatggcagcatccgcccagaagaagccgttagtctcggcgcgaaaatcttgactgagcat
ctgttcctcttcgtgggtctgaccgacgaagcgaaggatgcggagatcatggtcgagaaa
gaagaagacaagaaagaaaaagtgcttgaaatgacgatcgaagagctggatctttccgtt
cgttcctacaactgcttgaaacgtgccggcattaatacggtacaagagctgactacgaaa
accgaagaggatatgatgaaagtccggaacctcggacgcaaatccttggaggaagttcaa
gagaagctcgaagagttgggcctgggacttcgtacggaagaataa
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