Paenibacillus sp. JNUCC32: JNUCC32_28230
Help
Entry
JNUCC32_28230 CDS
T11069
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pajn Paenibacillus sp. JNUCC32
Brite
KEGG Orthology (KO) [BR:
pajn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pajn03016
]
JNUCC32_28230 (truA)
Enzymes [BR:
pajn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
JNUCC32_28230 (truA)
Transfer RNA biogenesis [BR:
pajn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JNUCC32_28230 (truA)
Prokaryotic type
JNUCC32_28230 (truA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
QOT09965
LinkDB
All DBs
Position
6389542..6390333
Genome browser
AA seq
263 aa
AA seq
DB search
MRNLLMKVSYDGTDYNGFQTQPGGHTIQDYLEEAIRRLSGEQLKITASGRTDAGVHARAQ
VFNFYTASPIPVERWCMALNTWLPEDIVVSDAMEVPMEFHSRHAAKRKTYRFTINANQYP
DLFNRRYQIHHHGKLDIAAMEQGLSHLIGTHDFTTFASRKSTKPSHVRTIFDAWIEKDTS
MCRPGTRDQGIIHTFISGNGFLQHMVRIIMGTLIEVGEGKRHPDDMKVILEAQNRAAAGP
TAMGKGLMLWEVDYDIAGQEKLQ
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaatcttctgatgaaggtcagttacgacggtaccgattataacggctttcagacc
cagcccggtggccacacgattcaggactatttggaggaagccattcgccgcttgtccgga
gagcagctcaagattacggcttccggccggacagatgccggggtgcatgcccgcgcccag
gtatttaatttttacacggcttcccccattcccgtggagcgttggtgcatggcattaaac
acttggctgccggaagatatcgtggtttcggatgcaatggaggtaccgatggaattccat
tcccgccatgcagcgaaacgcaaaacctatcgttttaccatcaatgcgaatcaatatccg
gatctattcaaccggcggtaccagatccatcatcatggaaaactggatatcgcagcgatg
gagcagggactttctcatctgatcggaacgcatgactttacaacgtttgcgtcacgaaag
tcgacgaagccgtcccatgtccgtacgatttttgatgcttggatcgagaaggatacatcc
atgtgccgcccaggcaccagagaccaaggaatcattcatacgttcatatccgggaacggg
tttctgcagcacatggtccggatcattatgggaacgttgattgaggtaggggaaggcaag
cgccatccggatgatatgaaggtcatattggaagcccaaaatcgggcggcagccggtccc
acagcgatgggcaagggcttgatgttatgggaagtggattacgatatcgccggccaagag
aagctgcaatga
DBGET
integrated database retrieval system
