Paenibacillus sp. JNUCC32: JNUCC32_30415
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Entry
JNUCC32_30415 CDS
T11069
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
pajn Paenibacillus sp. JNUCC32
Pathway
pajn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pajn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
JNUCC32_30415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pajn03400
]
JNUCC32_30415
DNA repair and recombination proteins [BR:
pajn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
JNUCC32_30415
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
CDC24_OB3
DUF7445
Motif
Other DBs
NCBI-ProteinID:
QOT10348
LinkDB
All DBs
Position
complement(6825187..6826116)
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AA seq
309 aa
AA seq
DB search
MHTVWKGAISFGLVHVPVKMFSATEDKDISMRYIHKECGSPLSYIRKCPVCEEEVAWEEI
TKGYEYEKGKFVLFEKEELEQLAEANSKNITILDFVDLTEIDPIYFQKTYYLSPDQAGAN
AYRLLLEAMKQSGKIGIAKIAIRSKSSLAAIRVLDECLSIETIFYPDEIRPISQVPNLPE
RTEVNAKELDMAKLLIDQLSTPFDPEKYTDDYRERLLDLINSKVSGEEIKIAPARQETNV
VDLMAALQASIEAVKPIGTDPGTKPKPRKTTRKTAAKEPAAKVSGGEADADAPKPKRRTA
KSKKSDSPS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgcatacggtttggaagggcgcgatcagctttggtctggtgcacgtgccggtgaagatg
ttctcggctacggaagacaaggatatttcgatgcggtacattcacaaggagtgcggcagc
ccgctctcctacatccgcaaatgtccggtatgtgaagaggaggttgcctgggaggagatt
acgaagggctatgagtacgagaaggggaaattcgtgttgttcgaaaaagaagagctggag
cagctcgccgaagcgaacagcaaaaacatcaccattctggactttgtcgatctgaccgag
atcgatccgatctacttccagaagacctactatctctcgcctgatcaagcaggtgccaat
gcataccggctgctgctggaagcgatgaagcagtccggcaaaatcggcatcgccaaaatt
gccattcgctccaagagcagtttggctgcgattcgcgtgctggatgaatgcctgtcgatc
gagacgattttctacccggatgaaatccggccgatttcgcaggtcccgaatttgcctgag
cgaaccgaggtcaacgccaaggaactggatatggccaaactgctgattgaccagttgtcg
actccctttgaccctgaaaaatatacggatgattatcgcgaacgcctgctggacctgatc
aacagcaaagtgtccggcgaagagatcaagattgcccctgctcgtcaggagaccaacgtt
gtggatctgatggcggcccttcaggccagcatcgaggccgtcaagccgatcggaacggac
ccgggcaccaagccgaagccgcgtaaaacgacccggaagaccgctgccaaagagcctgca
gccaaggtcagcggcggggaagctgacgcggatgcaccaaagccgaaacgccggacggcc
aaatccaagaaatccgattccccatcctaa
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