Cutibacterium acnes SK137: HMPREF0675_3248
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Entry
HMPREF0675_3248 CDS
T01215
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pak
Cutibacterium acnes SK137
Pathway
pak03030
DNA replication
pak03430
Mismatch repair
pak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMPREF0675_3248 (dnaX)
03430 Mismatch repair
HMPREF0675_3248 (dnaX)
03440 Homologous recombination
HMPREF0675_3248 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pak03032
]
HMPREF0675_3248 (dnaX)
03400 DNA repair and recombination proteins [BR:
pak03400
]
HMPREF0675_3248 (dnaX)
Enzymes [BR:
pak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMPREF0675_3248 (dnaX)
DNA replication proteins [BR:
pak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HMPREF0675_3248 (dnaX)
DNA repair and recombination proteins [BR:
pak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HMPREF0675_3248 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
Rad17
RuvB_N
AAA_30
AAA_14
AAA_5
AAA_18
AAA_16
nSTAND3
AAA_28
RNA_helicase
AAA_19
ABC_tran
TsaE
ORC-CDC6-like
SKI
Motif
Other DBs
NCBI-ProteinID:
ADE00355
LinkDB
All DBs
Position
279265..282138
Genome browser
AA seq
957 aa
AA seq
DB search
MDERAPEPGMENEAVEPEVFEQDGPDLFGDEESPRPVMPPDEATPDDDLPSDPCDPGLLD
GPETPEEPDGLETDEDEEDGADVIERVQELIGEAPDSNPDDDLPELPLALYRRYRPETFD
EVIGEDHVIEPLKRAILNNRVNHAYLFSGPRGCGKTTTARILARALNCEQGPTPTPCGTC
QSCRDLACGGPGSIDVIEIDAASHGGVDDARDLRERAFFAPVHSRYKIYIIDEAHMVTPQ
GFNALLKLVEEPPPHVKFIFATTEPEKVIGTIRSRTHHYPFRLVPPKVLVEYLAELCGKE
GIDVDHAVLPLVVRAGGGSVRDSLSVLDQLLGGAADGHVSYEQAAALLGYTPEALLDEIV
DAFAAGDAHQVFATIDKVIEVGQDPRRFAEDLLRRMRDLVIVSAVPDACRSGLIDVSPEQ
ATRLAHQVSGFGAGELTRAAEVLATGLTNMRGTTAPRLHLELMCSRILLPGADTDGRGIH
ARLERLERRIGVSGPVEEVERAERPVTAQPPTRYADTPQQASPPQHWPAENLQNPERRSA
PEHHDAPSPGQRPSGRPRPSRKDYRPGNQLAEQPPSNQHGDDGQMSQGPRQQGGPSTSQR
QQPRPQDHQPSQRDRQDTPPAQPQQPSAEQGGRADDAINITTLRREWPQVLEAVKDGGRV
AWMVLNQYAQVLEVHGNQATLGFSNIGARENFAAGNYPKVLHDAVVKVLGVDLAFTAVVG
EPPAAVRPESHPAEFQSGPAAQEPPDDDPWEQGPHHQDSTRGGEPSDPTHPGRDPQGRPG
DRQAISDDASKDAPPPPVTSSHPSEAGDDDPAPDATTEDQSADVRDEVVESGPVAGAPDP
DSGGAAEPKPDLVPGQDHVEAAGRAESARQIDPGGASSQGRPSAAAVSTAHRWSERAKGS
VRPLEVTSRSAQVEEPPDDGGEWDDTVVEESNESPIDLIMRELGGVVIDTDGDSTAR
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
gtggatgagagggcgcctgaaccgggcatggagaatgaggccgttgagcctgaggtcttc
gagcaagacggtccggatcttttcggtgacgaggagtcgccgcgccccgtcatgcctcct
gacgaagctacccctgatgatgaccttccctcggatccgtgcgatccagggttgctggac
ggccccgagacccctgaggaacccgacggcctcgagacagacgaggacgaggaggatggg
gctgacgttattgagcgggttcaggaattaatcggggaagcccctgacagtaaccccgat
gacgatcttccagagcttccgctggccctctaccggcgttaccgtccggagaccttcgat
gaggttattggtgaggatcatgttattgagcctctcaagcgcgcgatccttaataaccgc
gtcaaccatgcctacttgttttcagggccacgtggctgtggcaagacgacgaccgcccgc
attcttgcccgagcgctgaactgtgagcagggtccgacgccgactccctgcggaacgtgt
cagtcctgtcgcgacctggcctgtggtggacccggatcgattgacgtcatcgagattgac
gctgcctcccacggcggggtcgatgacgcacgtgatttacgcgaacgcgcctttttcgcc
ccagtacattcgcgttacaagatctacatcatcgatgaggcccacatggtcaccccgcag
ggctttaacgccttgctgaaactcgtcgaggagcccccgccacacgtcaagttcatcttc
gccaccacagaaccggaaaaggtcatcgggacgattcgctcccggactcaccactacccg
ttccgccttgtgccgccgaaggtgctcgtcgagtatctggctgagctatgcggcaaggag
gggatcgacgtcgaccacgccgtcctgccgctggtggtgcgtgccggtggtgggtcggtg
cgagacagcctttcggtgcttgaccagcttctcggcggtgctgctgatggccatgtcagc
tacgagcaggctgcggccctcctcggctacaccccagaggcccttctagacgagatcgtt
gacgcctttgccgccggggacgcccaccaggtttttgccacgatcgacaaggtcatcgag
gtaggtcaggaccctcgccgtttcgctgaggacctgctgcgtcgcatgcgcgacctcgtc
atcgtctcggcggtccctgacgcctgccggagcggactcatcgatgtctcaccggagcag
gccaccagacttgctcaccaggtttctggtttcggcgcaggcgaactcacccgcgctgcc
gaggtattggccaccgggctaactaacatgcgcggcactaccgctccccggctccacctg
gagctgatgtgctcgcggattctcctacccggagccgacacggatggtcgtggaatccat
gcacgtttggagcggttagagaggaggatcggcgtctccggccccgttgaggaggtcgaa
cgtgctgagcgtccggtcaccgcccagcctcccactcgctatgcggacacaccacagcag
gctagtcctcctcagcactggccagcggagaaccttcaaaacccggagcgtcggtccgca
ccagaacaccacgacgccccgtcgcccggacagcgtccatctgggcgtccacgtcccagc
cgtaaggattaccggcccggcaatcagcttgctgaacagccgccgtccaaccagcacggc
gatgatggtcagatgtcgcagggaccaaggcagcagggcggtccgtcaaccagtcagcgc
cagcaacccagacctcaggaccaccagccgtctcagcgggatcgtcaggacaccccaccg
gcccaacctcaacagccttccgccgaacaaggcggtcgcgccgacgatgccataaacatc
accaccttgcgtcgcgagtggccgcaggtcctcgaagccgtcaaggatggcggacgtgtc
gcatggatggtcctcaatcagtacgcccaggtgcttgaggttcacggcaatcaggccacc
ttgggattctctaatatcggagcccgggaaaatttcgctgccggtaattacccgaaggtc
ttgcatgacgccgttgtgaaggtgctgggagtggacctggccttcactgcggtcgtcggg
gagcctccggccgccgtccgccccgagtcccatcctgctgagtttcagagtggaccggct
gcccaggaaccaccggatgacgatccctgggagcaagggccacaccatcaagactcgacg
cgaggtggcgaaccgtcggaccctactcatcccggtcgggatcctcagggccgaccgggt
gaccgtcaggcgatttccgacgacgcttcaaaggatgcgccacccccgccggtgaccagc
tcccatcccagcgaggctggggacgacgatcctgcccctgatgccacgaccgaggaccag
tccgcagatgtccgcgatgaggtcgtggaatcgggacccgtagctggcgccccagaccct
gacagcggtggagctgccgaacctaaacctgatctggtgccaggccaggatcacgtcgag
gctgccggacgcgctgagtctgcgcggcagatcgaccctggtggcgcatcctcgcaaggc
cgtccctccgctgctgcggtcagtaccgcgcaccgttggagtgagcgcgctaaaggaagt
gttcgccctcttgaggtgacttcgcggtcagcccaggtcgaggagccgcctgatgacggc
ggggagtgggacgacaccgttgtggaggagtccaacgagagtccgattgacctcatcatg
cgcgagctaggtggggtcgtcatagacaccgacggtgactcaaccgccagatga
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