Cutibacterium acnes SK137: HMPREF0675_3629
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Entry
HMPREF0675_3629 CDS
T01215
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pak
Cutibacterium acnes SK137
Pathway
pak03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HMPREF0675_3629 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pak03400
]
HMPREF0675_3629 (xseA)
Enzymes [BR:
pak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HMPREF0675_3629 (xseA)
DNA repair and recombination proteins [BR:
pak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HMPREF0675_3629 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
Peptidase_S66
DUF1611_N
Motif
Other DBs
NCBI-ProteinID:
ADD99263
LinkDB
All DBs
Position
complement(646667..647914)
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AA seq
415 aa
AA seq
DB search
MVEPNAADNPRSLAWVVNAVKGWVERCGAIWVQAQVIEITRRSSPTQFLTLRDPIEEISA
SATCHRRVLDAAGPIETGMTVTALIRPTVWSRTGRLSFEISEITPTGEGQLLAQLERRKR
LLEAEGLFDVTLHRPIPVSPRGIGLITGAGSDAERDVQRHATLRWPAARFVVHNTRVQGP
MAAQQIIAALADLDADPTVDVIVIARGGGPLEDLLPFSDEALVRAVYATRTPVVSAIGHD
RDNPILDLVADLRASTPTDAGKLIVPDAAEQSQAIETARAQLRQAVTRFIDVESGHLSQI
RSRPVMVNPAATLDIAVERLDSTLQRLRLATHRVLDAESRDVNHMLERVRAMSPKATLDR
GYAILADTEGDSITSVNDTNARANLLVYLSDGTLSVTVDSLDRRTPNRPTFQEDS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggtcgagccgaacgccgccgacaatccgcgctccctggcgtgggtcgtcaacgccgtc
aaggggtgggtagagcgctgcggagccatctgggtgcaagcccaggtaatcgagatcacc
aggcgctccagtccgacacagttcctcaccctgcgcgaccccatcgaggagatttcggcc
agcgccacctgccatcgcagggtcctcgacgccgccggaccaatcgagacgggcatgacg
gttaccgccctcatccgaccgacagtgtggtcgcgcactgggaggctctccttcgaaatc
tccgagatcacccccaccggtgagggccagctcctcgcccaactagagagacgcaaacga
cttctcgaggctgaagggctcttcgatgtcaccctccataggccgattcccgtttcgccc
cgcggcatcggtctcatcaccggagctggctccgatgctgaacgtgacgtccagcgtcat
gccacgttgcgctggcctgccgcccgattcgtcgtccacaacacccgggtacagggcccc
atggcggcccaacagatcatcgccgccctcgctgaccttgacgccgaccccaccgtcgat
gtcatcgtcattgcccgcggtggtggccccttggaagacctcctccccttcagcgacgaa
gctctggtgagagcggtttacgccacccggactcccgtcgtttcggccatcggtcatgac
cgtgacaatccgattctcgatctcgtcgctgacctacgcgcgtcgacgcccactgacgcg
ggcaagctcatcgtcccggatgctgctgagcagtcccaagctatcgagacagccagagct
caacttcgccaggccgttacgaggttcatcgacgtcgaaagcggacacctctctcagatc
cgctcccgcccagtaatggtcaatccagcagccactctcgatatcgcggtagaaaggctc
gactccacactgcaacgtctacgtcttgctactcaccgcgtcctggacgccgagagccgc
gacgtcaaccacatgcttgagcgcgtgcgagcaatgtcgcccaaggccaccttggatcgc
ggctacgccatcctcgccgacacggagggcgactccatcacctcagtcaatgacaccaac
gcacgcgcgaacctattggtctacctgtctgacggtaccctcagcgtcaccgtcgattct
ctcgaccgccgcaccccaaaccgtcccaccttccaggaggactcatga
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