Cutibacterium acnes SK137: HMPREF0675_3789
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Entry
HMPREF0675_3789 CDS
T01215
Name
(GenBank) GIY-YIG catalytic domain protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pak
Cutibacterium acnes SK137
Pathway
pak03030
DNA replication
pak03430
Mismatch repair
pak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMPREF0675_3789
03430 Mismatch repair
HMPREF0675_3789
03440 Homologous recombination
HMPREF0675_3789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pak03032
]
HMPREF0675_3789
03400 DNA repair and recombination proteins [BR:
pak03400
]
HMPREF0675_3789
Enzymes [BR:
pak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMPREF0675_3789
DNA replication proteins [BR:
pak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HMPREF0675_3789
DNA repair and recombination proteins [BR:
pak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HMPREF0675_3789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
ADE00307
LinkDB
All DBs
Position
complement(808998..810752)
Genome browser
AA seq
584 aa
AA seq
DB search
MPLQPSFDDLGTSLSEVTFCVVDLETTGTSEGSQITEIGAVKVCGGRVEGEFQTLVCPTG
PIPASVQVLTGITHAMVRSAPSLSAVLPSWLEFSRSTALVAHNARFDIGFLQRAYAQHDY
PWGDPAVVDTLALARSVLARGEVRNYKLSTLSRLFHTTTTPSHRALADARATVDVLHGLI
DRVGNLGVTTLEDLLEMTHRVPQARRRRRVWAKDLTEGPGVYWFCLDKPAPAHPEVLYVG
KSVNIRRRVSQYFTASETRRRMDEMVRIATGVKARECSTQLEAGVRELRLIDAHQPRYNH
RSRRQGSVWWVTLTHEAHPRLAVVQRAHRDSQPPWGPFISRQAATRAAIILAEAFGLRQC
SGAMSRHPDGCPLAEMGRCSAPCLNPYVDYSTIVGFARLAMTGDVRDLTDRLAQRIARLS
AAERFEEAAEFTEDAQEVLRATRRRSRLVSLASCPEIVAARRDGASWEIHVIRHGRLAGA
GRCRLGIDPMPIIDAVCATAETVSAPPAGLPACTIEEAELVASWFEEPGVRLVDVIGEWS
WPAHCWMDTDDLAARVAALHHPGHNESDETDSQDRQARPQLTPV
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
gtgccccttcaaccgtctttcgacgacctgggaacttccctgtccgaagtcaccttctgc
gtcgtcgaccttgagactaccggtactagcgagggctcccagatcaccgagatcggagcc
gtgaaagtgtgtggaggccgcgtcgaaggcgagtttcaaaccctcgtctgcccaaccggg
cctatcccagcttcggtacaggtcctcaccggcatcacgcacgccatggtgcgctcggct
ccatcattgagcgctgtactacctagctggttagagtttagtcgcagcacggcacttgta
gcacacaatgctcgttttgatattggtttccttcaacgcgcctacgctcaacatgattat
ccctggggcgacccagccgtcgtcgacaccctcgcgttagctcggtcagtgcttgcccgc
ggagaggtccgaaattacaagctcagcaccttatctcggctattccacaccacgacgacg
ccctcacaccgcgcccttgccgatgcgagggccaccgtcgacgtccttcacggactcatc
gacagagtcggcaatctcggcgtgacgacccttgaagacctcttagaaatgacccatcgg
gtaccgcaggctcggcgtcgccgacgggtgtgggctaaggaccttaccgaagggcccgga
gtctattggttttgcctggataaacctgcaccagcacatccggaggtcctttatgtcggt
aagtcggtcaacatccgacgccgagtatcccaatacttcacagcatcggaaacacgacgc
cgcatggacgagatggtgcgaatagctaccggcgtcaaagctcgcgagtgctctactcag
ctagaagcgggggtacgcgaactacgcctcattgacgctcaccaaccgcgctacaaccat
cgctctcgtcggcaaggatcggtgtggtgggttaccctcactcatgaggctcacccgaga
ctcgccgtcgtgcagcgagctcaccgcgattcccaaccgccgtggggccctttcattagc
cgtcaagcagcgactcgcgcggcgatcatactggctgaagcttttggcctgcgacagtgc
agtggagctatgtcacggcaccctgatggctgtcctctcgcagagatgggccgttgctca
gccccatgtttgaacccctacgtcgactactccaccatcgtcggctttgctcgtctcgcc
atgactggcgacgttcgcgacctcactgatcggcttgctcaacgcatcgcacggctgtcc
gcggcagaacgtttcgaagaggccgcagagttcaccgaagacgcccaagaggtgctgcgt
gccacccgacgtcgttcccgactggtctctctggcatcctgccctgaaattgtcgcggcg
cggcgcgatggcgcctcctgggagatccacgtcattcgacatggccgcttagcgggagct
ggacgatgccgtctgggtattgatccaatgcccattattgacgcagtgtgtgccaccgca
gaaaccgtttctgctccgccggccgggctaccagcctgcactattgaggaggccgagcta
gtggcttcctggtttgaagaacctggggtgcggctagttgacgtcatcggagaatggtcc
tggcccgcccattgctggatggacaccgatgatctcgctgcccgggtagccgccttacat
cacccaggtcacaacgagagcgacgagacagacagccaagaccgccaggcccgcccccag
ctgacgccggtatga
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